Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2066 and Psest_2067 are separated by 2 nucleotidesPsest_2067 and Psest_2068 overlap by 4 nucleotidesPsest_2068 and Psest_2069 are separated by 115 nucleotidesPsest_2069 and Psest_2070 are separated by 10 nucleotides Psest_2066: Psest_2066 - ABC-type uncharacterized transport system, permease component, at 2,192,268 to 2,193,341 _2066 Psest_2067: Psest_2067 - ABC-type oligopeptide transport system, periplasmic component, at 2,193,344 to 2,195,230 _2067 Psest_2068: Psest_2068 - ABC-type oligopeptide transport system, periplasmic component, at 2,195,227 to 2,197,056 _2068 Psest_2069: Psest_2069 - HDOD domain., at 2,197,172 to 2,198,647 _2069 Psest_2070: Psest_2070 - FOG: LysM repeat, at 2,198,658 to 2,200,106 _2070
Group Condition Psest_2066 Psest_2067 Psest_2068 Psest_2069 Psest_2070
stress Choline Lysine 20 mM -3.8 -3.3 +0.0 -0.0 +0.2
stress Chlorite 0.06 mM -2.8 -3.6 -0.5 +0.1 +0.6
stress Def Cephalothin 0.04 mg/ml -2.4 -2.5 -0.2 -0.2 -0.9
stress A22 0.005 mg/ml -1.3 -3.1 -1.4 +0.0 +0.0
stress Choline chloride 90 mM -3.4 -3.1 -0.6 -0.0 +1.5
stress Anaerobic 500 uM Zinc chloride sample3 -0.8 -3.9 -0.2 -0.0 -0.1
stress Bacitracin 0.25 mg/ml -0.1 -3.2 -0.3 +0.0 -1.5
RCH2 grown on a colony of Serratia -2.7 -2.4 +0.1 +0.0 +0.1
stress Choline chloride 90 mM -3.3 -1.7 -0.7 -0.0 +1.1
RCH2 grown on a colony of N2F3 -1.6 -3.1 +0.1 -0.3 +0.5
metal limitation Lactate-nitrite; anaerobic; with copper; sample3 +0.7 -4.2 -0.0 +0.0 -0.6
stress Def Vancomycin 0.016 mg/ml -1.9 +0.8 -0.7 -0.1 -1.8
stress L-Lysine 200 mM -1.5 -3.0 -0.4 +0.2 +1.2
temperature LB 26C sample1 +1.4 -3.7 -0.1 -0.1 -0.1
stress nitrate 250 mM +2.4 -2.9 -0.1 -0.4 -1.5
temperature LB 30C timecourse1 timepoint 3 +1.5 -2.5 -0.3 -0.2 -0.8
stress Def Benzethonium chloride 0.008 mM +1.7 -3.2 +0.2 +0.0 -0.5
stress L-Lysine 200 mM -1.3 -2.1 -0.2 +0.3 +1.5
RCH2 grown on a colony of ecoli +0.6 -3.3 +0.5 +0.2 +0.4
RCH2 grown on a colony of N2A2 +2.0 -2.9 -0.5 -0.1 -0.0
temperature LB 30C timecourse2 timepoint 2 +3.0 -3.0 +0.0 -0.1 -0.2
stress Gentamicin 0.0016 mg/ml +3.9 -1.2 -0.0 -0.3 -0.9
stress Chlorate 75 mM +1.5 +2.2 -0.4 -0.1 -1.1
radiation Ionizing radiation, 319.06 Gy, +4.6 -1.5 -0.4 +0.1 +0.0
nitrogen source L-Valine (N) +3.9 -1.1 +0.2 +0.1 +0.2
nitrogen source L-Isoleucine (N) +4.3 -0.5 +0.5 -0.1 +0.4
carbon source L-Alanine (C) +4.6 +0.5 +0.2 +0.0 -0.2
radiation Ionizing radiation, 319.06 Gy, +5.2 +0.0 +0.2 +0.3 +0.2
stress Spectinomycin 0.00625 mg/ml +4.4 +1.9 +2.2 -0.5 -0.4
stress Spectinomycin 0.00625 mg/ml +4.7 +1.6 +2.4 +0.2 -0.6
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