Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2056 and Psest_2057 are separated by 50 nucleotidesPsest_2057 and Psest_2058 are separated by 47 nucleotidesPsest_2058 and Psest_2059 are separated by 5 nucleotidesPsest_2059 and Psest_2060 are separated by 278 nucleotides Psest_2056: Psest_2056 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 2,180,784 to 2,181,698 _2056 Psest_2057: Psest_2057 - Predicted secreted protein, at 2,181,749 to 2,182,495 _2057 Psest_2058: Psest_2058 - Zn-dependent hydrolases, including glyoxylases, at 2,182,543 to 2,183,472 _2058 Psest_2059: Psest_2059 - ABC-type branched-chain amino acid transport systems, periplasmic component, at 2,183,478 to 2,184,716 _2059 Psest_2060: Psest_2060 - PQQ-dependent dehydrogenase, methanol/ethanol family, at 2,184,995 to 2,186,773 _2060
Group Condition Psest_2056 Psest_2057 Psest_2058 Psest_2059 Psest_2060
carbon source Ethanol (C) -1.6 -0.0 +0.2 +0.0 -2.0
carbon source Ethanol (C) -1.1 +0.0 +0.2 +0.1 -1.5
stress Polymyxin B sulfate 0.0001 mg/ml -0.4 -0.7 -0.0 -0.5 -0.1
RCH2 grown on a colony of N2A2 -0.4 -0.5 -0.2 -0.3 -0.2
temperature LB 26C sample1 -0.5 -0.2 -0.3 -0.3 -0.1
RCH2 grown on a colony of N2F3 -0.2 +0.0 -0.7 -0.7 +0.1
stress nitrate 250 mM -0.5 -0.0 -1.0 -0.0 +0.0
stress Benzalkonium Chloride 0.002 mg/ml -0.3 -0.7 -0.3 +0.1 +0.1
stress Chlorate 75 mM -0.1 +0.4 -0.4 -0.7 +0.2
vitamin With vitamins t1 +0.3 -0.6 -0.1 -0.4 +0.2
RCH2 grown on a colony of ecoli -0.3 -0.7 +0.3 +0.1 +0.1
RCH2 grown on a colony of Serratia -0.0 -0.7 -0.1 -0.2 +0.6
stress Zinc 0.12 mM +0.4 -0.8 +0.1 -0.3 +0.3
vitamin No vitamins t2 +0.1 -0.4 +0.3 -0.5 +0.4
stress Nalidixic 0.00390625 mg/ml +0.7 -1.0 -0.1 -0.1 +0.3
carbon source L-tyrosine (C) -0.3 +0.9 +0.0 -0.1 -0.4
RCH2 grown on a colony of ecoli -0.1 +0.6 -0.4 -0.1 +0.3
stress Nalidixic 0.00390625 mg/ml -0.2 +1.3 +0.2 -0.6 -0.2
stress Carbenicillin 0.008 mg/ml +0.4 +0.1 -0.4 +0.6 -0.0
stress Def Benzethonium chloride 0.008 mM +0.3 -0.6 +0.1 +0.5 +0.4
stress Carbenicillin 0.008 mg/ml +0.5 +0.5 -0.6 +0.2 +0.1
stress Doxycycline hyclate 0.0002 mg/ml +0.4 +0.7 -0.0 -0.3 +0.2
RCH2 grown on a colony of Serratia -0.3 +0.2 +0.5 +0.2 +0.4
stress Carbenicillin 0.0065 mg/ml -0.6 +0.9 +0.4 +0.2 +0.2
stress Def Carbenicillin 0.008 mg/ml +0.4 -0.1 +0.3 +0.3 +0.4
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.6 +0.5 +0.3 +0.2 -0.2
stress Furfuryl Alcohol 0.05 vol% +0.3 +0.3 +0.2 -0.0 +0.6
stress Thallium(I) acetate 0.09 mg/ml +0.4 +0.3 +0.3 +0.4 +0.2
RCH2 grown on a colony of N2F3 +0.7 +0.4 +0.5 -0.2 +0.3
stress Def Benzalkonium Chloride 0.002 mg/ml +1.0 +0.1 +0.5 +0.8 +1.3
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