Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 424 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Psest_2052 and Psest_2053 are separated by 131 nucleotides
Psest_2053 and Psest_2054 are separated by 165 nucleotides
Psest_2054 and Psest_2055 are separated by 308 nucleotides
Psest_2055 and Psest_2056 overlap by 1 nucleotides
Psest_2052: Psest_2052 - PAS domain S-box, at 2,175,909 to 2,177,225
_2052
Psest_2053: Psest_2053 - Uncharacterized low-complexity proteins, at 2,177,357 to 2,178,001
_2053
Psest_2054: Psest_2054 - PQQ-dependent dehydrogenase, methanol/ethanol family, at 2,178,167 to 2,180,038
_2054
Psest_2055: Psest_2055 - cytochrome c550
(from data)
, at 2,180,347 to 2,180,784
_2055
Psest_2056: Psest_2056 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 2,180,784 to 2,181,698
_2056
Group
Condition
Psest
_2052
Psest
_2053
Psest
_2054
Psest
_2055
Psest
_2056
carbon source
Ethanol (C)
+0.2
-1.7
-1.8
-4.4
-1.6
carbon source
Ethanol (C)
+0.3
-1.4
-1.6
-3.8
-1.1
nitrogen source
L-Glutamic (N)
-0.1
-1.9
-0.0
-0.1
-0.1
stress
nitrate 250 mM
-0.4
-0.5
-0.1
-0.4
-0.5
stress
Benzalkonium Chloride 0.002 mg/ml
-0.5
-0.3
-0.4
-0.3
-0.3
stress
Nickel (II) chloride 0.8 mM
-0.1
-0.4
-0.2
-1.0
+0.1
stress
Def Chlorate 40 mM
-0.3
-0.7
-0.3
+0.0
-0.3
nitrogen source
L-Isoleucine (N)
-0.3
-0.7
-0.1
-0.3
-0.2
stress
Chlorate 75 mM
-0.1
-1.4
-0.3
+0.2
-0.1
stress
Carbenicillin 0.0065 mg/ml
-0.4
-0.2
+0.1
-0.3
-0.6
stress
Carbenicillin 0.008 mg/ml
-0.5
-1.1
+0.3
-0.3
+0.5
stress
Chloride 200 mM
+0.4
-0.1
-0.2
-0.5
-0.3
stress
1-ethyl-3-methylimidazolium acetate 40 mM
-0.4
-0.6
+0.1
+0.5
-0.3
stress
Cobalt chloride 0.07 mM
-0.3
+0.3
-0.2
-0.6
+0.4
RCH2 grown on a colony of N2C3
+0.3
+0.3
-0.7
-0.2
-0.2
stress
A22 0.005 mg/ml
-0.2
-0.6
+0.2
+0.5
-0.2
stress
Nalidixic 0.00390625 mg/ml
+0.2
-0.5
-0.2
-0.4
+0.7
stress
sodium fluoride 8.5 mM
+0.2
-0.8
+0.1
+0.6
-0.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.3
-0.7
-0.1
+0.1
+0.6
stress
5-Hydroxymethylfurfural 5 mM
+0.5
-0.4
-0.1
+0.4
-0.3
vitamin
With vitamins t1
-0.1
-0.6
+0.2
+0.5
+0.3
temperature
LB 30C timecourse2 timepoint 2
+0.2
-0.6
-0.1
+0.3
+0.5
RCH2 grown on a colony of Serratia
-0.4
+0.6
+0.2
+0.4
-0.3
stress
Paraquat dichloride 0.015 mg/ml
+0.6
+0.4
-0.3
+0.4
-0.3
stress
perchlorate 12.5 mM
+0.2
+0.6
-0.2
+0.6
-0.2
stress
Lactate-nitrate; anaerobic; cadmium stress sample2
+0.3
+0.8
+0.2
+0.4
-0.4
RCH2 grown on a colony of 8R2A
+0.5
+0.7
-0.2
+0.2
+0.3
stress
Benzethonium chloride 0.01 mM
+0.1
+0.8
-0.0
+0.6
+0.1
RCH2 grown on a colony of N2F3
+0.3
+0.8
+0.6
-0.3
+0.7
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.2
+0.1
+0.6
+1.1
+1.0
remove
Psest_2052
plot
remove
Psest_2053
plot
remove
Psest_2054
remove
Psest_2055
plot
remove
Psest_2056
plot