Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0199 and Psest_0200 are separated by 281 nucleotidesPsest_0200 and Psest_0201 are separated by 120 nucleotidesPsest_0201 and Psest_0202 are separated by 131 nucleotidesPsest_0202 and Psest_0203 overlap by 20 nucleotides Psest_0199: Psest_0199 - PAS domain S-box, at 197,027 to 198,613 _0199 Psest_0200: Psest_0200 - hypothetical protein, at 198,895 to 199,059 _0200 Psest_0201: Psest_0201 - PAS domain S-box, at 199,180 to 200,760 _0201 Psest_0202: Psest_0202 - diguanylate cyclase (GGDEF) domain, at 200,892 to 202,823 _0202 Psest_0203: Psest_0203 - Signal transduction histidine kinase, at 202,804 to 204,204 _0203
Group Condition Psest_0199 Psest_0200 Psest_0201 Psest_0202 Psest_0203
carbon source Trisodium citrate (C) +0.4 N.D. +0.3 -0.1 -5.0
carbon source Trisodium citrate (C) +0.4 N.D. +0.3 -0.0 -4.7
stress Def Carbenicillin 0.008 mg/ml +0.1 N.D. -0.8 -1.0 -0.3
stress Def Phosphomycin 0.125 mg/ml -0.2 N.D. -1.0 -0.4 -0.4
stress Furfuryl Alcohol 0.05 vol% -0.6 N.D. -1.2 -0.0 +0.0
nitrogen source L-Alanine (N) -0.4 N.D. -1.0 +0.0 -0.3
nitrogen source Cytosine (N) -0.2 N.D. -0.6 -0.5 -0.4
stress Def Carbenicillin 0.02 mg/ml -0.0 N.D. -0.6 -1.0 +0.1
carbon source L-Proline (C) +0.2 N.D. -0.6 -0.3 +0.6
RCH2 grown on a colony of ecoli +0.9 N.D. +0.1 -0.3 -0.4
RCH2 grown on a colony of N2C3 +0.8 N.D. -0.7 +0.4 +0.0
stress Def 2-Furfuraldehyde 0.032 vol% +0.4 N.D. +0.7 -0.3 -0.2
stress nitrate 250 mM +0.9 N.D. +0.6 -0.4 -0.2
stress Def Benzethonium chloride 0.008 mM +1.0 N.D. +0.5 -0.1 -0.4
stress Def Doxycycline hyclate 0.0002 mg/ml -0.3 N.D. +0.3 +0.2 +0.8
stress Def Lomefloxacin 0.00004 mM +0.3 N.D. -0.3 +0.2 +0.8
stress Cephalothin 0.04 mg/ml +0.5 N.D. +0.5 -0.4 +0.5
stress Def Neomycin 0.0002 mg/ml -0.4 N.D. +0.5 +0.2 +0.9
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.9 N.D. +0.6 -0.0 -0.2
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.4 N.D. +0.8 -0.3 +0.4
stress Gentamicin 0.0016 mg/ml +0.5 N.D. +0.7 -0.3 +0.5
stress Def Nalidixic 0.001 mg/ml +0.3 N.D. +0.8 -0.1 +0.5
stress Fusidic 0.016 mg/ml +0.9 N.D. +0.1 -0.1 +0.7
stress Def Benzalkonium Chloride 0.002 mg/ml +0.9 N.D. +0.7 -0.2 +0.2
stress Def 5-Hydroxymethylfurfural 5 mM +0.5 N.D. +0.7 +0.1 +0.3
stress Benzalkonium Chloride 0.002 mg/ml +0.6 N.D. +0.4 +0.3 +0.4
stress Polymyxin B sulfate 0.0001 mg/ml +0.5 N.D. -0.1 +0.7 +0.7
stress Def Chloride 400 mM +0.4 N.D. +0.8 +0.1 +0.6
anaerobic nitrate reduction - anaerobic +0.4 N.D. +0.9 +0.2 +0.5
stress Chlorate 75 mM +0.7 N.D. +1.3 +0.2 +1.1
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