Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0018 and Psest_0019 are separated by 120 nucleotidesPsest_0019 and Psest_0020 are separated by 330 nucleotidesPsest_0020 and Psest_0021 are separated by 74 nucleotidesPsest_0021 and Psest_0022 overlap by 4 nucleotides Psest_0018: Psest_0018 - ectoine/hydroxyectoine ABC transporter, permease protein EhuC, at 18,287 to 18,946 _0018 Psest_0019: Psest_0019 - ectoine/hydroxyectoine ABC transporter solute-binding protein, at 19,067 to 19,924 _0019 Psest_0020: Psest_0020 - K+ transport systems, NAD-binding component, at 20,255 to 21,628 _0020 Psest_0021: Psest_0021 - ribosomal RNA small subunit methyltransferase RsmB, at 21,703 to 23,025 _0021 Psest_0022: Psest_0022 - methionyl-tRNA formyltransferase, at 23,022 to 23,966 _0022
Group Condition Psest_0018 Psest_0019 Psest_0020 Psest_0021 Psest_0022
stress D-Cycloserine 0.032 mg/ml +0.0 +0.1 -3.6 -0.1 N.D.
stress Carbenicillin 0.008 mg/ml -0.0 +0.0 -2.3 -0.6 N.D.
stress Gentamicin 0.0016 mg/ml +0.4 +0.2 -2.9 -0.6 N.D.
lb LB -0.1 -0.0 -1.6 -1.0 N.D.
stress Spectinomycin 0.00625 mg/ml -0.0 +0.1 -3.0 +0.4 N.D.
stress Fusidic 0.016 mg/ml -0.0 +0.1 -1.0 -1.4 N.D.
stress Fusidic 0.016 mg/ml +0.5 -0.1 -0.6 -2.1 N.D.
stress Spectinomycin 0.00625 mg/ml -0.4 +0.4 -2.5 +0.4 N.D.
stress benzoic 0.4 mg/ml +0.1 +0.3 -1.8 -0.8 N.D.
stress D-Cycloserine 0.032 mg/ml -0.0 -0.2 -2.7 +0.8 N.D.
stress Cisplatin 0.003 mg/ml -0.2 +0.1 -1.5 -0.5 N.D.
stress Fusidic 0.016 mg/ml +0.0 +0.1 -1.5 -0.7 N.D.
stress nitrite 2.5 mM -0.3 +0.2 -1.6 -0.2 N.D.
stress benzoic 0.4 mg/ml +0.1 +0.0 -1.8 +0.5 N.D.
stress nitrite 2.5 mM +0.1 -0.1 -1.7 +1.0 N.D.
RCH2 grown on a colony of Serratia -0.0 -0.0 -1.6 +1.2 N.D.
stress L-Lysine 200 mM +0.4 -0.0 +2.3 -2.5 N.D.
stress 5-Hydroxymethylfurfural 5 mM +0.4 -0.0 +0.9 -1.0 N.D.
stress 1-ethyl-3-methylimidazolium acetate 40 mM +0.0 -0.1 +1.5 -0.8 N.D.
nitrogen source Adenine (N) +0.1 +0.0 +1.7 -0.7 N.D.
stress nitrate 250 mM +0.5 -0.5 +2.3 -1.1 N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml +0.7 -0.0 +1.2 -0.5 N.D.
stress Def 2-Furfuraldehyde 0.032 vol% +0.6 +0.1 +1.6 -0.1 N.D.
stress sodium fluoride 8.5 mM +0.2 -0.1 +2.4 -0.3 N.D.
stress methylglyoxal 0.0016 vol% -0.3 -0.2 +2.6 +0.1 N.D.
carbon source L-Proline (C) +0.0 -0.0 +2.0 +0.4 N.D.
carbon source L-Proline (C) +0.0 +0.1 +2.1 +0.3 N.D.
nitrogen source L-Alanine (N) -0.0 +0.2 +2.8 -0.4 N.D.
stress Phosphomycin 0.012 mg/ml -0.1 -0.0 +2.9 +0.0 N.D.
stress Phosphomycin 0.012 mg/ml -0.0 +0.4 +2.6 +0.1 N.D.
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