Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2034 and Psest_2035 overlap by 4 nucleotidesPsest_2035 and Psest_2036 are separated by 72 nucleotidesPsest_2036 and Psest_2037 are separated by 120 nucleotidesPsest_2037 and Psest_2038 are separated by 28 nucleotides Psest_2034: Psest_2034 - ATPase related to the helicase subunit of the Holliday junction resolvase, at 2,155,159 to 2,156,484 _2034 Psest_2035: Psest_2035 - crcB protein, at 2,156,481 to 2,156,855 _2035 Psest_2036: Psest_2036 - seryl-tRNA synthetase, at 2,156,928 to 2,158,208 _2036 Psest_2037: Psest_2037 - uroporphyrin-III C-methyltransferase, at 2,158,329 to 2,159,723 _2037 Psest_2038: Psest_2038 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 2,159,752 to 2,160,417 _2038
Group Condition Psest_2034 Psest_2035 Psest_2036 Psest_2037 Psest_2038
stress sodium fluoride 6.25 mM -3.0 -7.3 N.D. -4.2 -0.6
stress Def sodium fluoride 25 mM -2.8 -8.1 N.D. -0.2 +0.1
stress sodium fluoride 8.5 mM -3.2 -6.7 N.D. -0.4 +0.4
stress methylglyoxal 0.0016 vol% -6.4 -0.5 N.D. -1.6 -0.6
stress Def methylglyoxal 0.01 vol% -5.6 -0.5 N.D. -0.1 +0.1
stress Paraquat dichloride 0.015 mg/ml +0.0 -0.7 N.D. -3.3 -0.2
stress D-Cycloserine 0.032 mg/ml -0.4 -1.0 N.D. -2.5 -0.3
stress Paraquat dichloride 0.015 mg/ml -0.2 -0.3 N.D. -3.2 +0.0
nitrogen source nitrite (N) -0.1 -0.2 N.D. -2.8 -0.0
carbon source Ethanol (C) -0.2 +0.1 N.D. +0.1 -3.2
carbon source acetate (C) -0.1 -0.4 N.D. -2.3 -0.2
RCH2 grown on a colony of N2F3 +0.0 -1.1 N.D. -1.6 -0.3
carbon source L-tyrosine (C) -0.4 -0.4 N.D. -1.8 -0.3
stress Gentamicin 0.0016 mg/ml -0.4 -0.7 N.D. -1.3 -0.4
carbon source Ethanol (C) +0.3 -0.1 N.D. +0.2 -3.1
carbon source L-tyrosine (C) -0.3 -0.6 N.D. -2.0 +0.4
stress Def Cephalothin 0.04 mg/ml -0.5 -0.5 N.D. -1.1 -0.4
nitrogen source nitrite (N) -0.2 +0.0 N.D. -2.3 +0.0
stress Def Chloride 400 mM -0.3 -0.2 N.D. -1.3 -0.4
stress Nickel (II) chloride 0.8 mM -0.5 +0.1 N.D. -1.4 -0.4
nitrogen source nitrite (N) +0.2 -0.1 N.D. -2.6 +0.4
nitrogen source nitrate (N) -0.0 +0.2 N.D. -2.2 +0.0
stress nitrate 250 mM -0.5 -1.6 N.D. +0.1 -0.1
nitrogen source nitrate (N) +0.1 +0.2 N.D. -1.9 -0.2
nitrogen source nitrate (N) +0.1 +0.1 N.D. -1.9 +0.5
carbon source L-Proline (C) -0.2 +0.1 N.D. -1.6 +0.4
stress Furfuryl Alcohol 0.05 vol% -0.2 +0.2 N.D. -1.9 +0.7
stress Polymyxin B sulfate 0.0001 mg/ml -0.3 +0.3 N.D. -1.6 +0.5
stress A22 0.005 mg/ml +0.0 -0.4 N.D. +2.3 +0.1
stress Def Benzalkonium Chloride 0.002 mg/ml +0.2 -0.1 N.D. +0.9 +2.9
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