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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_2034 and Psest_2035 overlap by 4 nucleotides
Psest_2035 and Psest_2036 are separated by 72 nucleotides
Psest_2036 and Psest_2037 are separated by 120 nucleotides
Psest_2037 and Psest_2038 are separated by 28 nucleotides
Psest_2034: Psest_2034 - ATPase related to the helicase subunit of the Holliday junction resolvase, at 2,155,159 to 2,156,484
_2034
Psest_2035: Psest_2035 - crcB protein, at 2,156,481 to 2,156,855
_2035
Psest_2036: Psest_2036 - seryl-tRNA synthetase, at 2,156,928 to 2,158,208
_2036
Psest_2037: Psest_2037 - uroporphyrin-III C-methyltransferase, at 2,158,329 to 2,159,723
_2037
Psest_2038: Psest_2038 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 2,159,752 to 2,160,417
_2038
Group
Condition
Psest
_2034
Psest
_2035
Psest
_2036
Psest
_2037
Psest
_2038
stress
sodium fluoride 6.25 mM
-3.0
-7.3
N.D.
-4.2
-0.6
stress
Def sodium fluoride 25 mM
-2.8
-8.1
N.D.
-0.2
+0.1
stress
sodium fluoride 8.5 mM
-3.2
-6.7
N.D.
-0.4
+0.4
stress
methylglyoxal 0.0016 vol%
-6.4
-0.5
N.D.
-1.6
-0.6
stress
Def methylglyoxal 0.01 vol%
-5.6
-0.5
N.D.
-0.1
+0.1
stress
Paraquat dichloride 0.015 mg/ml
+0.0
-0.7
N.D.
-3.3
-0.2
stress
D-Cycloserine 0.032 mg/ml
-0.4
-1.0
N.D.
-2.5
-0.3
stress
Paraquat dichloride 0.015 mg/ml
-0.2
-0.3
N.D.
-3.2
+0.0
nitrogen source
nitrite (N)
-0.1
-0.2
N.D.
-2.8
-0.0
carbon source
Ethanol (C)
-0.2
+0.1
N.D.
+0.1
-3.2
carbon source
acetate (C)
-0.1
-0.4
N.D.
-2.3
-0.2
RCH2 grown on a colony of N2F3
+0.0
-1.1
N.D.
-1.6
-0.3
carbon source
L-tyrosine (C)
-0.4
-0.4
N.D.
-1.8
-0.3
stress
Gentamicin 0.0016 mg/ml
-0.4
-0.7
N.D.
-1.3
-0.4
carbon source
Ethanol (C)
+0.3
-0.1
N.D.
+0.2
-3.1
carbon source
L-tyrosine (C)
-0.3
-0.6
N.D.
-2.0
+0.4
stress
Def Cephalothin 0.04 mg/ml
-0.5
-0.5
N.D.
-1.1
-0.4
nitrogen source
nitrite (N)
-0.2
+0.0
N.D.
-2.3
+0.0
stress
Def Chloride 400 mM
-0.3
-0.2
N.D.
-1.3
-0.4
stress
Nickel (II) chloride 0.8 mM
-0.5
+0.1
N.D.
-1.4
-0.4
nitrogen source
nitrite (N)
+0.2
-0.1
N.D.
-2.6
+0.4
nitrogen source
nitrate (N)
-0.0
+0.2
N.D.
-2.2
+0.0
stress
nitrate 250 mM
-0.5
-1.6
N.D.
+0.1
-0.1
nitrogen source
nitrate (N)
+0.1
+0.2
N.D.
-1.9
-0.2
nitrogen source
nitrate (N)
+0.1
+0.1
N.D.
-1.9
+0.5
carbon source
L-Proline (C)
-0.2
+0.1
N.D.
-1.6
+0.4
stress
Furfuryl Alcohol 0.05 vol%
-0.2
+0.2
N.D.
-1.9
+0.7
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.3
+0.3
N.D.
-1.6
+0.5
stress
A22 0.005 mg/ml
+0.0
-0.4
N.D.
+2.3
+0.1
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.2
-0.1
N.D.
+0.9
+2.9
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