Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_2031 and Psest_2032 are separated by 209 nucleotidesPsest_2032 and Psest_2033 are separated by 17 nucleotidesPsest_2033 and Psest_2034 are separated by 71 nucleotidesPsest_2034 and Psest_2035 overlap by 4 nucleotides Psest_2031: Psest_2031 - thioredoxin-disulfide reductase, at 2,150,881 to 2,151,828 _2031 Psest_2032: Psest_2032 - DNA segregation ATPase FtsK/SpoIIIE and related proteins, at 2,152,038 to 2,154,443 _2032 Psest_2033: Psest_2033 - periplasmic chaperone LolA, at 2,154,461 to 2,155,087 _2033 Psest_2034: Psest_2034 - ATPase related to the helicase subunit of the Holliday junction resolvase, at 2,155,159 to 2,156,484 _2034 Psest_2035: Psest_2035 - crcB protein, at 2,156,481 to 2,156,855 _2035
Group Condition Psest_2031 Psest_2032 Psest_2033 Psest_2034 Psest_2035
stress Def sodium fluoride 25 mM N.D. N.D. N.D. -2.8 -8.1
stress sodium fluoride 6.25 mM N.D. N.D. N.D. -3.0 -7.3
stress sodium fluoride 8.5 mM N.D. N.D. N.D. -3.2 -6.7
stress methylglyoxal 0.0016 vol% N.D. N.D. N.D. -6.4 -0.5
stress Def methylglyoxal 0.01 vol% N.D. N.D. N.D. -5.6 -0.5
stress nitrate 250 mM N.D. N.D. N.D. -0.5 -1.6
RCH2 grown on a colony of 8R2A N.D. N.D. N.D. -0.2 -1.4
stress D-Cycloserine 0.032 mg/ml N.D. N.D. N.D. -0.4 -1.0
stress Dimethyl Sulfoxide 5 vol% N.D. N.D. N.D. -0.6 -0.8
RCH2 grown on a colony of N2F3 N.D. N.D. N.D. +0.0 -1.1
stress Gentamicin 0.0016 mg/ml N.D. N.D. N.D. -0.4 -0.7
stress Cephalothin 0.04 mg/ml N.D. N.D. N.D. -0.3 -0.8
stress nitrite 2.5 mM N.D. N.D. N.D. -0.5 -0.6
stress Nalidixic 0.00390625 mg/ml N.D. N.D. N.D. -0.1 -0.9
stress Cisplatin 0.003 mg/ml N.D. N.D. N.D. -0.3 -0.7
stress Def Carbenicillin 0.02 mg/ml N.D. N.D. N.D. -0.7 -0.3
stress Def Cephalothin 0.04 mg/ml N.D. N.D. N.D. -0.5 -0.5
metal limitation Lactate-nitrite with YE; anaerobic; with copper; sample2 N.D. N.D. N.D. -0.3 -0.6
stress Lactate-nitrate; anaerobic; cadmium stress sample1 N.D. N.D. N.D. -0.4 -0.5
carbon source L-tyrosine (C) N.D. N.D. N.D. -0.3 -0.6
stress Cobalt chloride 0.05 mM N.D. N.D. N.D. -0.1 -0.8
stress 2-Furfuraldehyde 0.05 vol% N.D. N.D. N.D. -0.3 -0.6
stress A22 0.002 mg/ml N.D. N.D. N.D. -0.2 -0.7
carbon source L-Lactate (C) N.D. N.D. N.D. -0.3 -0.6
stress Lactate-nitrate; anaerobic; nickel stress sample2 N.D. N.D. N.D. -0.2 -0.7
RCH2 grown on a colony of N2F3 N.D. N.D. N.D. -0.9 +0.5
stress Neomycin 0.004 mg/ml N.D. N.D. N.D. -0.7 +0.3
vitamin With vitamins t2 N.D. N.D. N.D. +0.3 -0.5
stress Aluminum chloride 0.3 mM N.D. N.D. N.D. -0.4 +0.4
RCH2 grown on a colony of Serratia N.D. N.D. N.D. +0.6 -0.6
remove
Psest_2031
plot		 remove
Psest_2032
plot		 remove
Psest_2033		 remove
Psest_2034
plot		 remove
Psest_2035
plot