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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_2026 and Psest_2027 are separated by 29 nucleotides
Psest_2027 and Psest_2028 are separated by 124 nucleotides
Psest_2028 and Psest_2029 are separated by 100 nucleotides
Psest_2029 and Psest_2030 are separated by 52 nucleotides
Psest_2026: Psest_2026 - Uncharacterized conserved protein, at 2,146,283 to 2,146,645
_2026
Psest_2027: Psest_2027 - ATP-dependent Clp protease ATP-binding subunit clpA, at 2,146,675 to 2,148,945
_2027
Psest_2028: Psest_2028 - translation initiation factor IF-1, at 2,149,070 to 2,149,288
_2028
Psest_2029: Psest_2029 - Putative arginyl-tRNA:protein arginylyltransferase, at 2,149,389 to 2,150,096
_2029
Psest_2030: Psest_2030 - leucyl/phenylalanyl-tRNA--protein transferase, at 2,150,149 to 2,150,829
_2030
Group
Condition
Psest
_2026
Psest
_2027
Psest
_2028
Psest
_2029
Psest
_2030
stress
Lactate-nitrate; anaerobic; dichromate stress sample3
-1.4
-1.2
N.D.
-0.9
-0.4
stress
Lactate-nitrate; anaerobic; dichromate stress sample2
-1.7
-1.7
N.D.
-0.9
+0.3
RCH2 grown on a colony of N2F3
-0.8
-1.1
N.D.
-0.9
-1.0
stress
Lactate-nitrate; anaerobic; dichromate stress sample1
-1.5
-1.3
N.D.
-0.6
-0.4
stress
Def Carbenicillin 0.008 mg/ml
-0.7
-0.7
N.D.
-0.5
-1.0
carbon source
butyrate (C)
-0.1
-2.7
N.D.
+0.4
-0.3
nitrogen source
L-Isoleucine (N)
-0.5
-1.6
N.D.
-0.4
-0.2
nitrogen source
L-Isoleucine (N)
-0.5
-1.6
N.D.
-0.1
-0.4
nitrogen source
L-Isoleucine (N)
-0.2
-1.9
N.D.
-0.1
-0.1
carbon source
L-Leucine (C)
-0.8
-0.7
N.D.
-0.5
-0.3
nitrogen source
Cytosine (N)
-0.7
-1.1
N.D.
-0.2
-0.2
stress
Def Chlorate 40 mM
+0.3
-2.2
N.D.
-0.2
-0.2
nitrogen source
nitrite (N)
-0.4
-1.1
N.D.
-0.1
-0.6
nitrogen source
nitrite (N)
-0.2
-1.4
N.D.
-0.2
-0.3
nitrogen source
nitrite (N)
-0.0
-1.7
N.D.
+0.2
-0.5
carbon source
butyrate (C)
+0.1
-2.5
N.D.
+0.5
-0.2
nitrogen source
L-Alanine (N)
-0.1
-1.9
N.D.
-0.2
+0.1
nitrogen source
Putrescine (N)
-0.4
-1.5
N.D.
-0.1
+0.1
nitrogen source
Cytosine (N)
-0.6
-1.3
N.D.
+0.0
-0.1
nitrogen source
L-Alanine (N)
-0.1
-1.6
N.D.
-0.2
+0.3
stress
Chlorate 75 mM
-0.5
-0.3
N.D.
-1.0
+0.2
stress
Def Chlorate 20 mM
+0.5
-1.9
N.D.
-0.0
+0.1
carbon source
Glycolic Acid (C)
+0.0
-1.2
N.D.
+0.1
+0.8
carbon source
propionate (C)
-0.4
+0.8
N.D.
+1.1
-0.9
carbon source
propionate (C)
-0.9
+0.7
N.D.
+1.1
-0.3
carbon source
L-tyrosine (C)
+0.2
-0.8
N.D.
+0.6
+0.9
stress
Benzalkonium Chloride 0.002 mg/ml
+0.7
+0.9
N.D.
-0.5
+0.3
carbon source
butyrate (C)
+1.8
-1.1
N.D.
+1.7
-0.4
stress
Fusidic 0.016 mg/ml
+1.3
+1.6
N.D.
-0.6
-0.0
stress
Def Benzalkonium Chloride 0.002 mg/ml
+2.2
+2.4
N.D.
-0.5
-0.5
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