Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2023 and Psest_2024 are separated by 360 nucleotidesPsest_2024 and Psest_2025 are separated by 61 nucleotidesPsest_2025 and Psest_2026 are separated by 218 nucleotidesPsest_2026 and Psest_2027 are separated by 29 nucleotides Psest_2023: Psest_2023 - isocitrate dehydrogenase, NADP-dependent, monomeric type, at 2,141,897 to 2,144,125 _2023 Psest_2024: Psest_2024 - isocitrate dehydrogenase, NADP-dependent, prokaryotic type, at 2,144,486 to 2,145,742 _2024 Psest_2025: Psest_2025 - cold shock domain protein CspD, at 2,145,804 to 2,146,064 _2025 Psest_2026: Psest_2026 - Uncharacterized conserved protein, at 2,146,283 to 2,146,645 _2026 Psest_2027: Psest_2027 - ATP-dependent Clp protease ATP-binding subunit clpA, at 2,146,675 to 2,148,945 _2027
Group Condition Psest_2023 Psest_2024 Psest_2025 Psest_2026 Psest_2027
stress nitrate 250 mM -2.4 -0.2 -4.1 -0.5 -0.1
stress Def Benzethonium chloride 0.008 mM -0.8 -0.4 -5.9 -0.2 +0.9
stress syringaldehyde 3 mM -0.5 -0.3 -4.9 +0.1 +0.0
RCH2 grown on a colony of N2F3 +0.8 +0.1 -5.2 -0.2 -0.6
stress Benzethonium chloride 0.01 mM -2.8 +0.1 -2.5 -0.1 +0.2
stress 2-Furfuraldehyde 0.05 vol% -1.9 -0.2 -2.8 +0.2 -0.0
stress Cisplatin 0.0016 mg/ml -2.4 -0.1 -1.7 -0.2 +0.0
RCH2 grown on a colony of N2F3 -1.2 -0.1 -1.2 -0.8 -1.1
stress perchlorate 25 mM -0.7 +0.1 -3.1 -0.4 -0.2
stress L-Lysine 200 mM -1.1 -0.2 -2.3 +0.1 -0.6
RCH2 grown on a colony of 8R2A -2.8 +0.3 -1.4 +0.3 -0.1
stress Thallium(I) acetate 0.09 mg/ml +0.4 -0.2 -3.2 -0.3 -0.4
stress D-Cycloserine 0.032 mg/ml +0.4 +0.0 -3.7 +0.1 -0.3
stress Gentamicin 0.0016 mg/ml -2.3 +0.1 -2.0 +0.0 +0.6
carbon source butyrate (C) +0.5 +0.4 -1.6 -0.1 -2.7
stress Dimethyl Sulfoxide 5 vol% -0.6 +0.2 -3.2 +0.1 +0.2
stress Cobalt chloride 0.08 mM -0.3 +0.4 -3.2 +0.2 -0.2
carbon source propionate (C) +0.4 -0.6 -1.7 -0.9 +0.7
stress Bacitracin 0.25 mg/ml +1.9 -0.2 -3.6 +0.2 +0.3
stress Benzalkonium Chloride 0.002 mg/ml -0.1 +0.2 -3.0 +0.7 +0.9
stress Spectinomycin 0.00625 mg/ml -2.4 +0.0 +1.2 -0.4 +0.4
nitrogen source L-Isoleucine (N) -0.6 -0.1 +1.8 -0.2 -1.9
carbon source butyrate (C) +1.0 +0.7 -0.2 +0.1 -2.5
stress Def Benzalkonium Chloride 0.002 mg/ml +0.4 -0.0 -4.2 +2.2 +2.4
stress Fusidic 0.016 mg/ml +0.4 +0.4 -2.6 +1.3 +1.6
stress Choline chloride 90 mM -1.9 -0.1 +3.2 +0.4 +0.2
carbon source L-tyrosine (C) +3.4 +0.2 +1.2 -0.2 -1.1
carbon source butyrate (C) +0.9 +0.9 +1.1 +1.8 -1.1
carbon source L-tyrosine (C) +2.6 +0.4 +1.4 +0.2 -0.8
stress Paraquat dichloride 0.015 mg/ml +2.8 +0.2 +1.1 -0.1 +0.2
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