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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_2008 and Psest_2009 are separated by 135 nucleotides
Psest_2009 and Psest_2010 are separated by 564 nucleotides
Psest_2010 and Psest_2011 are separated by 218 nucleotides
Psest_2011 and Psest_2012 are separated by 123 nucleotides
Psest_2008: Psest_2008 - 23S rRNA, at 2,123,852 to 2,126,738
_2008
Psest_2009: Psest_2009 - 5S rRNA, at 2,126,874 to 2,126,989
_2009
Psest_2010: Psest_2010 - queuosine biosynthesis protein QueD, at 2,127,554 to 2,127,925
_2010
Psest_2011: Psest_2011 - Predicted permease, at 2,128,144 to 2,129,460
_2011
Psest_2012: Psest_2012 - Predicted permease, at 2,129,584 to 2,130,678
_2012
Group
Condition
Psest
_2008
Psest
_2009
Psest
_2010
Psest
_2011
Psest
_2012
stress
Nickel (II) chloride 0.8 mM
N.D.
N.D.
N.D.
-5.9
-0.6
stress
nitrite 2.5 mM
N.D.
N.D.
N.D.
-5.7
+0.2
stress
Paraquat dichloride 0.015 mg/ml
N.D.
N.D.
N.D.
-5.0
-0.4
stress
nitrite 2.5 mM
N.D.
N.D.
N.D.
-5.3
-0.0
stress
Paraquat dichloride 0.015 mg/ml
N.D.
N.D.
N.D.
-5.0
-0.2
stress
D-Cycloserine 0.032 mg/ml
N.D.
N.D.
N.D.
-5.2
+0.2
stress
nitrite 2.5 mM
N.D.
N.D.
N.D.
-5.2
+0.1
stress
Furfuryl Alcohol 0.05 vol%
N.D.
N.D.
N.D.
-5.2
+0.2
stress
D-Cycloserine 0.032 mg/ml
N.D.
N.D.
N.D.
-5.2
+0.2
stress
Nickel (II) chloride 1 mM
N.D.
N.D.
N.D.
-3.8
-0.3
stress
Cobalt chloride 0.06 mM
N.D.
N.D.
N.D.
-3.8
-0.3
stress
Nickel (II) chloride 1 mM
N.D.
N.D.
N.D.
-3.5
-0.6
stress
Benzalkonium Chloride 0.002 mg/ml
N.D.
N.D.
N.D.
-3.7
+0.3
stress
methylglyoxal 0.0016 vol%
N.D.
N.D.
N.D.
-2.8
-0.4
stress
sodium fluoride 6.25 mM
N.D.
N.D.
N.D.
-2.4
-0.1
stress
Nickel (II) chloride 0.9 mM
N.D.
N.D.
N.D.
-2.0
-0.4
stress
nitrate 200 mM
N.D.
N.D.
N.D.
-2.1
-0.2
stress
Gentamicin 0.0016 mg/ml
N.D.
N.D.
N.D.
-2.0
-0.1
stress
Nickel (II) chloride 0.8 mM
N.D.
N.D.
N.D.
-1.5
-0.4
stress
nitrate 250 mM
N.D.
N.D.
N.D.
-2.1
+0.2
stress
Nickel (II) chloride 0.9 mM
N.D.
N.D.
N.D.
-1.5
-0.4
stress
Fusidic 0.016 mg/ml
N.D.
N.D.
N.D.
-1.8
+0.1
stress
Fusidic 0.016 mg/ml
N.D.
N.D.
N.D.
-1.5
-0.0
stress
Bacitracin 0.25 mg/ml
N.D.
N.D.
N.D.
-1.7
+0.2
stress
Nickel (II) chloride 0.8 mM
N.D.
N.D.
N.D.
-1.0
-0.5
stress
Polymyxin B sulfate 0.0001 mg/ml
N.D.
N.D.
N.D.
-1.6
+0.1
stress
benzoic 0.4 mg/ml
N.D.
N.D.
N.D.
-1.6
+0.0
stress
Bacitracin 0.25 mg/ml
N.D.
N.D.
N.D.
-1.8
+0.3
stress
Vancomycin 0.016 mg/ml
N.D.
N.D.
N.D.
-1.3
+0.3
stress
nitrate 200 mM
N.D.
N.D.
N.D.
-1.3
+0.3
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