Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1997 and Psest_1998 are separated by 17 nucleotidesPsest_1998 and Psest_1999 are separated by 113 nucleotidesPsest_1999 and Psest_2000 are separated by 68 nucleotidesPsest_2000 and Psest_2001 are separated by 80 nucleotides Psest_1997: Psest_1997 - 6-phosphogluconolactonase, at 2,114,680 to 2,115,393 _1997 Psest_1998: Psest_1998 - Entner-Doudoroff aldolase, at 2,115,411 to 2,116,055 _1998 Psest_1999: Psest_1999 - pseudouridine synthase, at 2,116,169 to 2,117,302 _1999 Psest_2000: Psest_2000 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,117,371 to 2,118,111 _2000 Psest_2001: Psest_2001 - 2-phosphoglycolate phosphatase, prokaryotic, at 2,118,192 to 2,118,863 _2001
Group Condition Psest_1997 Psest_1998 Psest_1999 Psest_2000 Psest_2001
stress Chlorate 75 mM -1.7 -0.2 -1.5 -3.2 -1.6
stress syringaldehyde 4 mM -0.7 -0.6 -3.6 -1.2 -0.8
stress Def Chlorate 40 mM -0.5 -0.0 -1.3 -4.1 -0.4
stress Def Chlorate 20 mM -0.6 +0.2 -1.1 -3.0 -1.3
stress A22 0.002 mg/ml -1.6 +0.1 -2.6 +0.3 -1.4
stress Benzethonium chloride 0.01 mM -1.5 -0.1 -3.1 -0.1 +0.0
RCH2 grown on a colony of Serratia -0.5 +0.6 -2.9 -1.0 -0.7
lb LB +0.6 -0.6 -3.6 -0.3 -0.1
stress Thallium(I) acetate 0.09 mg/ml -0.8 +0.3 -2.0 +0.1 -1.6
stress Def Cephalothin 0.04 mg/ml +0.4 +0.3 -1.7 -1.1 -1.8
stress Furfuryl Alcohol 0.05 vol% +0.5 +0.4 -4.5 -0.3 +0.1
carbon source L-Alanine (C) -0.3 -0.1 -3.5 +0.6 -0.4
anaerobic Nitrate/ lactate media with Nitrate 250mM -1.2 +0.2 -2.2 +0.4 -0.9
stress Chlorite 0.06 mM +0.4 +0.2 +0.2 -1.1 -3.4
nitrogen source L-Citrulline (N) +0.1 +1.2 -4.2 -0.8 +0.6
stress Choline chloride 90 mM +1.3 +0.0 -3.6 +0.2 -0.8
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.8 +0.2 -2.5 -0.2 -1.2
stress Gentamicin 0.0016 mg/ml -0.6 -0.8 -0.1 +1.7 -2.6
stress nitrate 200 mM -0.6 +0.9 -3.1 +0.7 -0.3
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +1.5 -0.5 -2.4 +0.0 -0.8
stress Vancomycin 0.016 mg/ml +0.7 +0.6 -3.6 +0.4 +0.1
stress methylglyoxal 0.0016 vol% -0.5 +0.5 -4.8 +1.0 +2.0
stress nitrate 250 mM -0.1 -1.0 -2.4 +2.2 +0.2
stress Fusidic 0.016 mg/ml -0.0 -0.5 -2.3 +2.3 +0.1
carbon source butyrate (C) +0.7 -0.1 -0.0 +2.4 -1.6
stress Choline Lysine 20 mM +1.5 +0.2 -0.8 +1.7 -0.9
stress Neomycin 0.004 mg/ml -0.2 +0.5 +1.8 +1.3 -1.6
stress Nalidixic 0.00390625 mg/ml +1.2 -0.2 +1.3 -1.9 +2.2
stress Def Benzalkonium Chloride 0.002 mg/ml +0.0 +0.3 +2.2 +1.5 -1.0
stress Nalidixic 0.00390625 mg/ml -0.6 -0.6 +2.5 +0.2 +2.5
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