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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_1987 and Psest_1988 are separated by 191 nucleotides
Psest_1988 and Psest_1989 are separated by 93 nucleotides
Psest_1989 and Psest_1990 are separated by 74 nucleotides
Psest_1990 and Psest_1991 are separated by 46 nucleotides
Psest_1987: Psest_1987 - cytidylate kinase, at 2,104,808 to 2,105,497
_1987
Psest_1988: Psest_1988 - ribosomal protein S1, at 2,105,689 to 2,107,371
_1988
Psest_1989: Psest_1989 - Transcriptional regulators, at 2,107,465 to 2,107,908
_1989
Psest_1990: Psest_1990 - Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs, at 2,107,983 to 2,109,155
_1990
Psest_1991: Psest_1991 - Glutathione S-transferase, at 2,109,202 to 2,109,804
_1991
Group
Condition
Psest
_1987
Psest
_1988
Psest
_1989
Psest
_1990
Psest
_1991
stress
1-ethyl-3-methylimidazolium acetate 40 mM
N.D.
N.D.
+1.1
-1.6
-3.6
stress
1-ethyl-3-methylimidazolium acetate 40 mM
N.D.
N.D.
+1.7
-2.0
-3.5
stress
acetate 80 mM
N.D.
N.D.
-0.2
-1.0
-1.3
stress
Cholin acetate 40 mM
N.D.
N.D.
+1.0
-1.5
-2.0
stress
acetate 80 mM
N.D.
N.D.
-0.2
-0.7
-1.3
carbon source
propionate (C)
N.D.
N.D.
-0.6
-1.6
+0.0
RCH2 grown on a colony of N2C3
N.D.
N.D.
-0.5
-1.7
+0.2
stress
Carbenicillin 0.008 mg/ml
N.D.
N.D.
-0.7
-1.1
-0.2
RCH2 grown on a colony of 8R2A
N.D.
N.D.
-0.2
-1.6
+0.1
stress
perchlorate 25 mM
N.D.
N.D.
+0.4
-0.7
-0.8
RCH2 grown on a colony of N2F3
N.D.
N.D.
-1.4
+0.3
+0.2
carbon source
butyrate (C)
N.D.
N.D.
-1.4
+0.0
+0.5
nitrogen source
L-Alanine (N)
N.D.
N.D.
+1.4
-1.3
-0.6
stress
Choline chloride 90 mM
N.D.
N.D.
+0.9
-0.5
-0.7
carbon source
L-tyrosine (C)
N.D.
N.D.
+1.0
-1.0
-0.2
stress
Choline chloride 90 mM
N.D.
N.D.
+1.0
-0.5
-0.6
carbon source
butyrate (C)
N.D.
N.D.
-1.2
+0.9
+0.6
nitrogen source
L-Alanine (N)
N.D.
N.D.
+1.7
-0.7
-0.6
nitrogen source
L-Isoleucine (N)
N.D.
N.D.
+1.3
-0.4
-0.2
carbon source
butyrate (C)
N.D.
N.D.
-1.3
+1.0
+1.1
nitrogen source
L-Alanine (N)
N.D.
N.D.
+1.6
-0.5
-0.2
stress
methylglyoxal 0.0016 vol%
N.D.
N.D.
+0.7
+1.0
-0.7
carbon source
L-Proline (C)
N.D.
N.D.
+1.5
-0.1
-0.3
stress
nitrate 200 mM
N.D.
N.D.
+0.6
+1.1
-0.4
carbon source
L-Isoleucine (C)
N.D.
N.D.
+1.7
-0.3
-0.0
carbon source
L-Isoleucine (C)
N.D.
N.D.
+1.7
+0.1
-0.1
stress
Furfuryl Alcohol 0.05 vol%
N.D.
N.D.
+0.4
+1.3
-0.1
carbon source
L-Proline (C)
N.D.
N.D.
+1.7
+0.3
-0.3
nitrogen source
L-Valine (N)
N.D.
N.D.
+0.2
+0.5
+1.1
carbon source
L-Proline (C)
N.D.
N.D.
+1.9
+0.5
-0.3
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