Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1987 and Psest_1988 are separated by 191 nucleotidesPsest_1988 and Psest_1989 are separated by 93 nucleotidesPsest_1989 and Psest_1990 are separated by 74 nucleotidesPsest_1990 and Psest_1991 are separated by 46 nucleotides Psest_1987: Psest_1987 - cytidylate kinase, at 2,104,808 to 2,105,497 _1987 Psest_1988: Psest_1988 - ribosomal protein S1, at 2,105,689 to 2,107,371 _1988 Psest_1989: Psest_1989 - Transcriptional regulators, at 2,107,465 to 2,107,908 _1989 Psest_1990: Psest_1990 - Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs, at 2,107,983 to 2,109,155 _1990 Psest_1991: Psest_1991 - Glutathione S-transferase, at 2,109,202 to 2,109,804 _1991
Group Condition Psest_1987 Psest_1988 Psest_1989 Psest_1990 Psest_1991
stress 1-ethyl-3-methylimidazolium acetate 40 mM N.D. N.D. +1.1 -1.6 -3.6
stress 1-ethyl-3-methylimidazolium acetate 40 mM N.D. N.D. +1.7 -2.0 -3.5
stress acetate 80 mM N.D. N.D. -0.2 -1.0 -1.3
stress Cholin acetate 40 mM N.D. N.D. +1.0 -1.5 -2.0
stress acetate 80 mM N.D. N.D. -0.2 -0.7 -1.3
carbon source propionate (C) N.D. N.D. -0.6 -1.6 +0.0
RCH2 grown on a colony of N2C3 N.D. N.D. -0.5 -1.7 +0.2
stress Carbenicillin 0.008 mg/ml N.D. N.D. -0.7 -1.1 -0.2
RCH2 grown on a colony of 8R2A N.D. N.D. -0.2 -1.6 +0.1
stress perchlorate 25 mM N.D. N.D. +0.4 -0.7 -0.8
RCH2 grown on a colony of N2F3 N.D. N.D. -1.4 +0.3 +0.2
carbon source butyrate (C) N.D. N.D. -1.4 +0.0 +0.5
nitrogen source L-Alanine (N) N.D. N.D. +1.4 -1.3 -0.6
stress Choline chloride 90 mM N.D. N.D. +0.9 -0.5 -0.7
carbon source L-tyrosine (C) N.D. N.D. +1.0 -1.0 -0.2
stress Choline chloride 90 mM N.D. N.D. +1.0 -0.5 -0.6
carbon source butyrate (C) N.D. N.D. -1.2 +0.9 +0.6
nitrogen source L-Alanine (N) N.D. N.D. +1.7 -0.7 -0.6
nitrogen source L-Isoleucine (N) N.D. N.D. +1.3 -0.4 -0.2
carbon source butyrate (C) N.D. N.D. -1.3 +1.0 +1.1
nitrogen source L-Alanine (N) N.D. N.D. +1.6 -0.5 -0.2
stress methylglyoxal 0.0016 vol% N.D. N.D. +0.7 +1.0 -0.7
carbon source L-Proline (C) N.D. N.D. +1.5 -0.1 -0.3
stress nitrate 200 mM N.D. N.D. +0.6 +1.1 -0.4
carbon source L-Isoleucine (C) N.D. N.D. +1.7 -0.3 -0.0
carbon source L-Isoleucine (C) N.D. N.D. +1.7 +0.1 -0.1
stress Furfuryl Alcohol 0.05 vol% N.D. N.D. +0.4 +1.3 -0.1
carbon source L-Proline (C) N.D. N.D. +1.7 +0.3 -0.3
nitrogen source L-Valine (N) N.D. N.D. +0.2 +0.5 +1.1
carbon source L-Proline (C) N.D. N.D. +1.9 +0.5 -0.3
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