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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0193 and Psest_0194 are separated by 178 nucleotides
Psest_0194 and Psest_0195 are separated by 110 nucleotides
Psest_0195 and Psest_0196 are separated by 390 nucleotides
Psest_0196 and Psest_0197 are separated by 131 nucleotides
Psest_0193: Psest_0193 - conserved hypothetical protein, at 189,910 to 190,341
_0193
Psest_0194: Psest_0194 - hypothetical protein, at 190,520 to 190,756
_0194
Psest_0195: Psest_0195 - Small integral membrane protein, at 190,867 to 191,037
_0195
Psest_0196: Psest_0196 - Uncharacterized membrane protein, required for spore maturation in B.subtilis., at 191,428 to 192,657
_0196
Psest_0197: Psest_0197 - TRAP transporter, 4TM/12TM fusion protein, at 192,789 to 195,341
_0197
Group
Condition
Psest
_0193
Psest
_0194
Psest
_0195
Psest
_0196
Psest
_0197
stress
Carbenicillin 0.008 mg/ml
-1.8
-0.4
+0.2
-1.5
-0.4
stress
Def methylglyoxal 0.01 vol%
-2.7
-0.2
-0.2
-0.5
-0.2
stress
Nalidixic 0.00390625 mg/ml
-3.9
+0.4
+0.1
-0.4
+0.0
carbon source
L-Proline (C)
-0.8
-0.4
-0.3
-0.7
-1.4
carbon source
L-Proline (C)
-1.7
-0.1
-0.2
-0.4
-1.2
RCH2 grown on a colony of ecoli
-3.1
+0.4
+0.1
-0.1
-0.7
stress
Benzethonium chloride 0.0125 mM
-1.5
-0.4
-0.6
-0.9
+0.0
stress
Def Benzethonium chloride 0.008 mM
-3.9
+0.2
-0.0
+0.4
+0.0
carbon source
D,L-Lactate (C)
-3.2
-0.1
+0.1
-0.0
-0.0
nitrogen source
Adenine (N)
-2.6
-0.2
+0.0
-0.4
+0.3
stress
Lactate-nitrate; anaerobic; copper stress sample1
-3.6
-0.1
+0.7
+0.0
+0.2
stress
Def Carbenicillin 0.008 mg/ml
+0.8
-0.5
-0.2
-3.0
+0.0
carbon source
butyrate (C)
-3.7
+0.5
+0.1
+0.3
+0.2
stress
Benzalkonium Chloride 0.002 mg/ml
-2.6
+0.3
+0.3
-0.5
+0.2
stress
Chloride 200 mM
-2.8
+0.1
+0.5
+0.4
-0.4
stress
Fusidic 0.016 mg/ml
-3.0
+0.1
-0.0
+0.7
+0.0
stress
Lactate-nitrate; anaerobic; copper stress sample3
-2.7
+0.2
+0.1
+0.1
+0.2
RCH2 grown on a colony of Serratia
-2.9
+0.3
+0.6
+0.4
-0.4
stress
Choline chloride 90 mM
-3.0
+0.4
+0.7
+0.0
-0.0
stress
Chloride 200 mM
-2.4
+0.5
+0.3
+0.6
-0.5
stress
Def 2-Furfuraldehyde 0.032 vol%
-2.0
-0.3
+0.6
+0.5
+0.1
stress
Neomycin 0.004 mg/ml
-2.3
+0.3
+0.2
+0.3
+0.3
stress
nitrate 250 mM
-2.4
+0.5
+0.0
+0.7
+0.1
RCH2 grown on a colony of N2F3
-1.6
+0.8
-0.3
-0.3
+0.5
nitrogen source
L-Glutamic (N)
+1.0
+0.4
-0.5
-0.1
-1.4
stress
Def Carbenicillin 0.02 mg/ml
+2.2
+0.2
-0.2
-1.0
+0.1
stress
Bacitracin 0.25 mg/ml
+1.8
+0.8
+0.2
-1.2
+0.3
stress
Bacitracin 0.25 mg/ml
+1.7
+0.5
+0.4
-0.7
+0.3
carbon source
L-tyrosine (C)
+1.3
-0.7
+0.1
-0.1
+1.6
stress
Phosphomycin 0.012 mg/ml
-0.3
+0.3
-0.2
+0.5
+2.0
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