Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1979 and Psest_1980 are separated by 8 nucleotidesPsest_1980 and Psest_1981 are separated by 339 nucleotidesPsest_1981 and Psest_1982 are separated by 134 nucleotidesPsest_1982 and Psest_1983 are separated by 102 nucleotides Psest_1979: Psest_1979 - Nucleotidyltransferase/DNA polymerase involved in DNA repair, at 2,092,694 to 2,094,106 _1979 Psest_1980: Psest_1980 - Uncharacterized conserved protein, at 2,094,115 to 2,094,732 _1980 Psest_1981: Psest_1981 - S-methyl-5-thioribose-1-phosphate isomerase, at 2,095,072 to 2,096,148 _1981 Psest_1982: Psest_1982 - DNA gyrase, A subunit, at 2,096,283 to 2,099,093 _1982 Psest_1983: Psest_1983 - phosphoserine aminotransferase, at 2,099,196 to 2,100,281 _1983
Group Condition Psest_1979 Psest_1980 Psest_1981 Psest_1982 Psest_1983
radiation Ionizing radiation, 319.06 Gy, -0.9 -0.8 -0.2 N.D. N.D.
vitamin With vitamins t2 -0.9 -0.8 -0.1 N.D. N.D.
stress sodium fluoride 6.25 mM -0.9 -0.6 -0.3 N.D. N.D.
nitrogen source L-Citrulline (N) -0.6 -0.8 -0.4 N.D. N.D.
stress Def Cisplatin 0.0002 mg/ml -1.2 -0.5 +0.0 N.D. N.D.
nitrogen source L-Isoleucine (N) -0.8 -0.2 -0.5 N.D. N.D.
radiation Ionizing radiation, 319.06 Gy, -0.8 -1.0 +0.2 N.D. N.D.
stress Cisplatin 0.003 mg/ml -1.5 +0.1 +0.1 N.D. N.D.
nutrient Min media with glucose -0.7 -0.6 +0.2 N.D. N.D.
stress 1-ethyl-3-methylimidazolium acetate 40 mM +0.4 -0.5 -0.8 N.D. N.D.
carbon source propionate (C) -0.2 -0.8 +0.6 N.D. N.D.
stress Choline chloride 90 mM +0.7 -0.7 -0.3 N.D. N.D.
stress Carbenicillin 0.008 mg/ml +0.6 -0.8 +0.2 N.D. N.D.
stress Thallium(I) acetate 0.08 mg/ml +0.8 -0.5 -0.2 N.D. N.D.
stress Cobalt chloride 0.07 mM +0.7 -0.9 +0.3 N.D. N.D.
nitrogen source nitrite (N) +0.7 +0.3 -0.9 N.D. N.D.
stress methylglyoxal 0.0016 vol% +0.5 -0.5 +0.6 N.D. N.D.
RCH2 grown on a colony of N2F3 +0.6 -0.6 +0.7 N.D. N.D.
carbon source L-Lactate (C) +0.6 +0.8 -0.2 N.D. N.D.
temperature LB 30C timecourse2 timepoint 1 +0.5 +0.9 -0.2 N.D. N.D.
stress Def Thallium(I) acetate 0.125 mg/ml +0.6 +0.8 -0.1 N.D. N.D.
stress Cephalothin 0.04 mg/ml +0.9 +0.1 +0.4 N.D. N.D.
stress Neomycin 0.004 mg/ml +0.3 +0.4 +0.8 N.D. N.D.
carbon source L-tyrosine (C) -0.2 +0.6 +1.2 N.D. N.D.
temperature LB 30C timecourse2 timepoint 2 +0.5 +1.0 +0.2 N.D. N.D.
stress Bacitracin 0.25 mg/ml +0.4 +0.7 +0.6 N.D. N.D.
stress Bacitracin 0.25 mg/ml +0.3 +0.9 +0.7 N.D. N.D.
temperature LB 30C timecourse1 timepoint 2 +0.5 +1.2 +0.2 N.D. N.D.
stress Paraquat dichloride 0.015 mg/ml +0.3 +0.8 +0.9 N.D. N.D.
stress Def Carbenicillin 0.008 mg/ml +1.1 +0.9 +0.3 N.D. N.D.
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