Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_0017 and Psest_0018 overlap by 4 nucleotidesPsest_0018 and Psest_0019 are separated by 120 nucleotidesPsest_0019 and Psest_0020 are separated by 330 nucleotidesPsest_0020 and Psest_0021 are separated by 74 nucleotides Psest_0017: Psest_0017 - ectoine/hydroxyectoine ABC transporter, permease protein EhuD, at 17,631 to 18,290 _0017 Psest_0018: Psest_0018 - ectoine/hydroxyectoine ABC transporter, permease protein EhuC, at 18,287 to 18,946 _0018 Psest_0019: Psest_0019 - ectoine/hydroxyectoine ABC transporter solute-binding protein, at 19,067 to 19,924 _0019 Psest_0020: Psest_0020 - K+ transport systems, NAD-binding component, at 20,255 to 21,628 _0020 Psest_0021: Psest_0021 - ribosomal RNA small subunit methyltransferase RsmB, at 21,703 to 23,025 _0021
Group Condition Psest_0017 Psest_0018 Psest_0019 Psest_0020 Psest_0021
stress D-Cycloserine 0.032 mg/ml +0.2 +0.0 +0.1 -3.6 -0.1
stress Gentamicin 0.0016 mg/ml -0.2 +0.4 +0.2 -2.9 -0.6
stress Carbenicillin 0.008 mg/ml -0.1 -0.0 +0.0 -2.3 -0.6
lb LB +0.0 -0.1 -0.0 -1.6 -1.0
stress Spectinomycin 0.00625 mg/ml +0.0 -0.0 +0.1 -3.0 +0.4
stress Spectinomycin 0.00625 mg/ml -0.3 -0.4 +0.4 -2.5 +0.4
stress Fusidic 0.016 mg/ml -0.3 +0.5 -0.1 -0.6 -2.1
temperature LB 30C timecourse1 timepoint 3 -0.2 +0.0 -0.2 -1.5 -0.6
stress benzoic 0.4 mg/ml -0.1 +0.1 +0.3 -1.8 -0.8
stress Fusidic 0.016 mg/ml +0.1 -0.0 +0.1 -1.0 -1.4
stress D-Cycloserine 0.032 mg/ml +0.2 -0.0 -0.2 -2.7 +0.8
stress Fusidic 0.016 mg/ml +0.2 +0.0 +0.1 -1.5 -0.7
stress nitrite 2.5 mM +0.2 -0.3 +0.2 -1.6 -0.2
stress Carbenicillin 0.0065 mg/ml +0.3 +0.2 -0.3 -0.9 -0.8
stress benzoic 0.4 mg/ml +0.1 +0.1 +0.0 -1.8 +0.5
stress nitrite 2.5 mM +0.2 +0.1 -0.1 -1.7 +1.0
RCH2 grown on a colony of Serratia +0.3 -0.0 -0.0 -1.6 +1.2
stress L-Lysine 200 mM -0.1 +0.4 -0.0 +2.3 -2.5
stress Chlorate 75 mM -0.5 -0.6 -0.1 +1.0 +0.4
stress nitrate 250 mM -0.7 +0.5 -0.5 +2.3 -1.1
nitrogen source Adenine (N) -0.1 +0.1 +0.0 +1.7 -0.7
stress Def Benzalkonium Chloride 0.002 mg/ml -0.2 +0.7 -0.0 +1.2 -0.5
stress Def 2-Furfuraldehyde 0.032 vol% -0.2 +0.6 +0.1 +1.6 -0.1
stress sodium fluoride 8.5 mM -0.1 +0.2 -0.1 +2.4 -0.3
stress methylglyoxal 0.0016 vol% +0.0 -0.3 -0.2 +2.6 +0.1
carbon source L-Proline (C) -0.0 +0.0 +0.1 +2.1 +0.3
carbon source L-Proline (C) +0.1 +0.0 -0.0 +2.0 +0.4
nitrogen source L-Alanine (N) -0.0 -0.0 +0.2 +2.8 -0.4
stress Phosphomycin 0.012 mg/ml +0.1 -0.1 -0.0 +2.9 +0.0
stress Phosphomycin 0.012 mg/ml +0.0 -0.0 +0.4 +2.6 +0.1
remove
Psest_0017
plot
remove
Psest_0018
plot
remove
Psest_0019
remove
Psest_0020
plot
remove
Psest_0021
plot