Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1903 and Psest_1904 are separated by 74 nucleotidesPsest_1904 and Psest_1905 are separated by 116 nucleotidesPsest_1905 and Psest_1907 are separated by 284 nucleotidesPsest_1907 and Psest_1908 are separated by 3 nucleotides Psest_1903: Psest_1903 - chorismate synthase, at 2,013,534 to 2,014,625 _1903 Psest_1904: Psest_1904 - Arabinose efflux permease, at 2,014,700 to 2,015,851 _1904 Psest_1905: Psest_1905 - Uncharacterized conserved protein, contains double-stranded beta-helix domain, at 2,015,968 to 2,016,513 _1905 Psest_1907: Psest_1907 - hypothetical protein, at 2,016,798 to 2,017,007 _1907 Psest_1908: Psest_1908 - hypothetical protein, at 2,017,011 to 2,017,205 _1908
Group Condition Psest_1903 Psest_1904 Psest_1905 Psest_1907 Psest_1908
stress Cephalothin 0.04 mg/ml N.D. -0.4 -1.3 -2.1 N.D.
stress nitrite 2.5 mM N.D. -0.2 -1.1 -1.6 N.D.
stress L-Lysine 200 mM N.D. -0.5 -0.7 -1.7 N.D.
stress Def Cephalothin 0.08 mg/ml N.D. -0.1 -0.1 -2.4 N.D.
stress nitrite 2.5 mM N.D. -0.3 -1.2 -1.0 N.D.
temperature LB 30C timecourse2 timepoint 2 N.D. -0.2 -0.1 -2.3 N.D.
RCH2 grown on a colony of N2F3 N.D. -0.7 -1.0 -0.7 N.D.
stress Def Benzethonium chloride 0.008 mM N.D. -0.7 -0.5 -1.2 N.D.
stress Benzalkonium Chloride 0.002 mg/ml N.D. -1.1 -1.1 -0.2 N.D.
anaerobic nitrate reduction - anaerobic N.D. -0.0 -1.4 -0.9 N.D.
stress Vancomycin 0.016 mg/ml N.D. -0.1 -0.6 -1.5 N.D.
stress D-Cycloserine 0.032 mg/ml N.D. -0.4 -1.7 -0.1 N.D.
stress Thallium(I) acetate 0.08 mg/ml N.D. +0.1 -1.2 -0.9 N.D.
stress Gentamicin 0.0016 mg/ml N.D. +0.1 -2.5 +0.4 N.D.
stress 1-ethyl-3-methylimidazolium acetate 40 mM N.D. +0.1 -1.6 -0.5 N.D.
nitrogen source L-Isoleucine (N) N.D. -1.0 +0.5 -1.4 N.D.
stress Bacitracin 0.25 mg/ml N.D. -0.3 -1.7 +0.2 N.D.
stress benzoic 0.4 mg/ml N.D. -0.4 -1.8 +0.3 N.D.
RCH2 grown on a colony of Serratia N.D. +0.1 -2.1 +0.3 N.D.
stress nitrate 200 mM N.D. +1.0 -1.4 -1.2 N.D.
stress Cisplatin 0.0016 mg/ml N.D. +0.3 -0.9 -0.9 N.D.
stress Cisplatin 0.003 mg/ml N.D. +0.6 -0.6 -1.3 N.D.
stress A22 0.002 mg/ml N.D. -0.0 -1.0 +1.1 N.D.
lb LB N.D. -0.4 -0.7 +1.3 N.D.
lb LB N.D. +0.5 -1.0 +0.7 N.D.
stress Chloride 200 mM N.D. +1.2 -0.9 +0.2 N.D.
stress Lactate-nitrate; anaerobic sample2 N.D. -0.4 -0.3 +1.5 N.D.
stress Lactate-nitrate; anaerobic; cadmium stress sample1 N.D. -0.6 +0.5 +1.4 N.D.
stress Def Carbenicillin 0.02 mg/ml N.D. +1.3 +0.8 -0.1 N.D.
stress Def Neomycin 0.0008 mg/ml N.D. +0.8 +0.0 +1.4 N.D.
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