Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1890 and Psest_1891 are separated by 19 nucleotidesPsest_1891 and Psest_1892 are separated by 174 nucleotidesPsest_1892 and Psest_1893 overlap by 4 nucleotidesPsest_1893 and Psest_1894 are separated by 56 nucleotides Psest_1890: Psest_1890 - Uncharacterized conserved protein, at 1,998,974 to 1,999,795 _1890 Psest_1891: Psest_1891 - segregation and condensation protein B, at 1,999,815 to 2,000,585 _1891 Psest_1892: Psest_1892 - 6-phosphogluconate dehydratase, at 2,000,760 to 2,002,589 _1892 Psest_1893: Psest_1893 - glucokinase, proteobacterial type, at 2,002,586 to 2,003,548 _1893 Psest_1894: Psest_1894 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 2,003,605 to 2,004,339 _1894
Group Condition Psest_1890 Psest_1891 Psest_1892 Psest_1893 Psest_1894
stress Def Chlorate 40 mM -0.4 N.D. -0.7 -0.5 N.D.
stress Def 2-Furfuraldehyde 0.032 vol% -1.0 N.D. +0.0 -0.4 N.D.
stress sodium fluoride 6.25 mM +0.0 N.D. -0.5 -0.9 N.D.
stress Benzalkonium Chloride 0.002 mg/ml -0.1 N.D. -0.5 -0.7 N.D.
stress nitrate 250 mM +0.2 N.D. -0.1 -1.2 N.D.
stress Def Chloride 400 mM +0.2 N.D. -0.5 -0.6 N.D.
stress Benzethonium chloride 0.0125 mM -0.4 N.D. -0.6 +0.5 N.D.
carbon source L-tyrosine (C) +0.2 N.D. +0.1 -0.8 N.D.
stress nitrite 2.5 mM +0.6 N.D. +0.1 -0.6 N.D.
stress syringaldehyde 4 mM +0.2 N.D. +0.5 -0.5 N.D.
nutrient Min media with glucose +0.7 N.D. -0.6 +0.3 N.D.
RCH2 grown on a colony of ecoli +0.1 N.D. +0.7 -0.4 N.D.
stress Choline chloride 90 mM -0.4 N.D. -0.1 +0.9 N.D.
stress D-Cycloserine 0.032 mg/ml +1.0 N.D. +0.0 -0.5 N.D.
stress syringaldehyde 4 mM +0.5 N.D. -0.2 +0.4 N.D.
temperature Glucose defined 30C timecourse1 timepoint 3 +0.5 N.D. -0.4 +0.7 N.D.
stress Nickel (II) chloride 0.8 mM +0.7 N.D. +0.5 -0.3 N.D.
stress Furfuryl Alcohol 0.05 vol% +0.5 N.D. -0.2 +0.6 N.D.
stress syringaldehyde 3 mM +0.5 N.D. -0.2 +0.6 N.D.
stress Choline Lysine 20 mM +0.7 N.D. -0.2 +0.5 N.D.
stress Carbenicillin 0.008 mg/ml +0.9 N.D. -0.3 +0.5 N.D.
stress Lactate-nitrate; anaerobic; copper stress sample2 +0.3 N.D. +0.3 +0.6 N.D.
RCH2 grown on a colony of ecoli +0.7 N.D. +0.5 +0.1 N.D.
temperature LB 30C timecourse1 timepoint 3 +0.1 N.D. +0.2 +1.0 N.D.
stress Choline Lysine 20 mM +0.8 N.D. +0.2 +0.3 N.D.
stress Carbenicillin 0.008 mg/ml +1.1 N.D. +0.2 +0.1 N.D.
nitrogen source nitrite (N) +0.4 N.D. +0.4 +0.6 N.D.
stress Chlorate 75 mM +0.8 N.D. +0.3 +0.4 N.D.
temperature LB 30C timecourse1 timepoint 2 +0.5 N.D. +0.1 +0.9 N.D.
temperature LB 30C timecourse2 timepoint 2 +0.3 N.D. +0.3 +0.8 N.D.
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