Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1875 and Psest_1876 are separated by 135 nucleotidesPsest_1876 and Psest_1877 are separated by 87 nucleotidesPsest_1877 and Psest_1878 are separated by 81 nucleotidesPsest_1878 and Psest_1879 are separated by 0 nucleotides Psest_1875: Psest_1875 - Adenylate cyclase, family 3 (some proteins contain HAMP domain), at 1,985,565 to 1,987,067 _1875 Psest_1876: Psest_1876 - Predicted membrane protein, at 1,987,203 to 1,987,520 _1876 Psest_1877: Psest_1877 - AraC-type DNA-binding domain-containing proteins, at 1,987,608 to 1,988,657 _1877 Psest_1878: Psest_1878 - Uncharacterized protein conserved in bacteria, at 1,988,739 to 1,989,671 _1878 Psest_1879: Psest_1879 - Trk-type K+ transport systems, membrane components, at 1,989,672 to 1,991,123 _1879
Group Condition Psest_1875 Psest_1876 Psest_1877 Psest_1878 Psest_1879
stress Benzalkonium Chloride 0.002 mg/ml -0.3 -0.6 -1.1 -0.5 -1.3
stress Gentamicin 0.0016 mg/ml -0.8 +0.3 +0.2 -0.0 -2.9
stress D-Cycloserine 0.032 mg/ml -0.0 +0.3 -0.9 +0.4 -2.9
stress D-Cycloserine 0.032 mg/ml -0.1 +0.1 +0.2 -0.3 -3.0
stress A22 0.005 mg/ml -0.2 -0.4 -0.8 +0.2 -1.9
RCH2 grown on a colony of Serratia +0.1 -0.8 +0.9 -1.1 -2.0
lb LB -0.2 -0.3 -0.6 +0.4 -2.0
RCH2 grown on a colony of N2F3 +0.2 -0.3 -2.0 +0.9 -1.3
stress benzoic 0.4 mg/ml -0.0 +0.6 -0.0 -0.5 -2.2
stress Spectinomycin 0.00625 mg/ml +0.2 -0.4 +0.1 +0.4 -2.4
stress nitrate 200 mM +0.1 -1.3 -1.4 +0.0 +0.7
stress Choline Lysine 20 mM +0.2 +0.4 +0.2 +0.3 -2.7
temperature LB 30C timecourse1 timepoint 3 -0.2 +0.3 -0.3 +0.8 -2.2
stress Nickel (II) chloride 1 mM -0.1 +0.4 +0.6 -0.7 -1.6
stress A22 0.002 mg/ml -0.0 +0.1 -0.6 +1.1 -1.9
stress benzoic 0.4 mg/ml +0.0 +0.4 -0.4 +0.7 -2.0
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.4 -0.3 +0.8 +0.1 -2.1
stress benzoic 0.4 mg/ml -0.1 +0.8 +0.5 +0.3 -2.6
carbon source L-tyrosine (C) +0.3 +0.8 +0.1 -0.5 -1.7
carbon source L-tyrosine (C) +0.0 -0.9 +1.1 +1.0 -2.0
carbon source propionate (C) -0.2 -0.4 -0.7 -1.1 +1.9
stress nitrate 250 mM -0.2 -0.4 -1.6 +0.3 +2.5
stress L-Lysine 200 mM -0.1 -0.7 +0.3 -0.2 +2.0
stress Nalidixic 0.00390625 mg/ml -0.1 -0.6 +0.7 +0.2 +1.8
stress Phosphomycin 0.012 mg/ml +0.1 +0.5 -0.6 -0.1 +2.5
RCH2 grown on a colony of ecoli +0.4 +0.6 +2.2 +0.4 -1.1
stress methylglyoxal 0.0016 vol% -0.2 +0.4 -0.2 +0.2 +2.5
stress Benzethonium chloride 0.0125 mM -0.3 +0.8 +0.9 +0.4 +1.0
stress 1-ethyl-3-methylimidazolium acetate 40 mM +0.1 +0.7 +0.2 +0.7 +2.2
stress Choline chloride 90 mM +0.1 +0.7 +0.3 +1.1 +1.9
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