Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1872 and Psest_1873 are separated by 3 nucleotidesPsest_1873 and Psest_1874 are separated by 131 nucleotidesPsest_1874 and Psest_1875 are separated by 74 nucleotidesPsest_1875 and Psest_1876 are separated by 135 nucleotides Psest_1872: Psest_1872 - selT/selW/selH selenoprotein domain, at 1,983,437 to 1,983,718 _1872 Psest_1873: Psest_1873 - Predicted permease, DMT superfamily, at 1,983,722 to 1,984,600 _1873 Psest_1874: Psest_1874 - AraC-type DNA-binding domain-containing proteins, at 1,984,732 to 1,985,490 _1874 Psest_1875: Psest_1875 - Adenylate cyclase, family 3 (some proteins contain HAMP domain), at 1,985,565 to 1,987,067 _1875 Psest_1876: Psest_1876 - Predicted membrane protein, at 1,987,203 to 1,987,520 _1876
Group Condition Psest_1872 Psest_1873 Psest_1874 Psest_1875 Psest_1876
stress Chlorate 75 mM -1.0 -1.2 -1.0 -0.2 -0.2
stress Lactate-nitrate; anaerobic; dichromate stress sample1 -0.4 -1.4 -0.4 -0.1 -0.8
RCH2 grown on a colony of 8R2A -1.8 -0.8 -0.4 -0.0 +0.1
stress Lactate-nitrate; anaerobic; dichromate stress sample3 -0.3 -0.9 -0.3 -0.3 -0.8
anaerobic Nitrite/ lactate media with Nitrite 20mM -0.7 -0.7 +0.1 -0.1 -0.9
anaerobic Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten -0.8 -0.7 +0.2 -0.0 -0.9
stress Gentamicin 0.0016 mg/ml -0.0 -1.3 -0.5 -0.8 +0.3
stress Cisplatin 0.003 mg/ml -0.1 -0.5 +0.2 -0.1 -1.7
stress Nickel (II) chloride 0.9 mM +0.8 -0.8 -1.5 -0.5 +0.1
RCH2 grown on a colony of Serratia -1.5 -1.0 +0.5 -0.1 +0.2
temperature LB 30C timecourse2 timepoint 2 +0.6 -0.9 -0.8 -0.2 -0.2
stress nitrate 250 mM -0.5 +0.6 -0.9 -0.2 -0.4
stress Nickel (II) chloride 0.8 mM +1.1 -0.9 -0.7 -0.7 +0.0
stress nitrate 200 mM +0.5 +0.3 -0.6 +0.1 -1.3
stress Benzethonium chloride 0.0125 mM +0.3 -0.4 -1.3 -0.3 +0.8
RCH2 grown on a colony of N2F3 -1.1 -0.9 -0.2 +0.4 +0.9
stress Choline chloride 90 mM +0.2 -2.0 +0.4 +0.1 +0.7
stress perchlorate 12.5 mM -0.4 +1.2 -0.9 -0.0 -0.1
stress perchlorate 12.5 mM -0.3 +0.6 +0.6 -0.1 -0.9
RCH2 grown on a colony of N2C3 +0.9 -0.7 +0.3 +0.2 -0.8
RCH2 grown on a colony of ecoli -0.3 -1.1 +0.6 +0.4 +0.6
stress D-Cycloserine 0.032 mg/ml +0.5 -1.3 +0.7 -0.0 +0.3
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample1 -0.6 +0.9 +0.7 -0.1 -0.5
stress Def 2-Furfuraldehyde 0.032 vol% -0.6 +1.3 +0.3 -0.5 +0.1
nitrogen source L-Glutamic (N) -0.1 -1.0 +1.4 +0.1 +0.4
stress Benzethonium chloride 0.0125 mM +0.7 +1.2 -0.6 -0.0 +0.8
stress Furfuryl Alcohol 0.05 vol% -0.2 +0.7 +0.5 +0.3 +1.0
stress Def Benzalkonium Chloride 0.002 mg/ml +0.7 +1.1 +0.2 -0.1 +0.5
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.3 +0.8 +1.0 +0.1 +0.3
carbon source L-tyrosine (C) +0.3 +1.4 +0.2 +0.3 +0.8
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