Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1828 and Psest_1829 are separated by 465 nucleotidesPsest_1829 and Psest_1830 are separated by 271 nucleotidesPsest_1830 and Psest_1831 are separated by 446 nucleotidesPsest_1831 and Psest_1832 overlap by 8 nucleotides Psest_1828: Psest_1828 - polyphosphate:AMP phosphotransferase, at 1,927,701 to 1,929,200 _1828 Psest_1829: Psest_1829 - acetyl-CoA acetyltransferases, at 1,929,666 to 1,930,850 _1829 Psest_1830: Psest_1830 - Periplasmic protein involved in polysaccharide export, at 1,931,122 to 1,932,222 _1830 Psest_1831: Psest_1831 - bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family, at 1,932,669 to 1,933,436 _1831 Psest_1832: Psest_1832 - Predicted glycosyltransferases, at 1,933,429 to 1,934,304 _1832
Group Condition Psest_1828 Psest_1829 Psest_1830 Psest_1831 Psest_1832
stress Chlorate 75 mM -0.6 -0.6 N.D. N.D. N.D.
temperature LB 30C timecourse1 timepoint 3 -0.7 -0.0 N.D. N.D. N.D.
stress 1-ethyl-3-methylimidazolium acetate 40 mM -0.2 -0.5 N.D. N.D. N.D.
metal limitation Lactate; aerobic; sample2 -0.4 -0.2 N.D. N.D. N.D.
stress 1-ethyl-3-methylimidazolium acetate 40 mM +0.1 -0.8 N.D. N.D. N.D.
RCH2 grown on a colony of N2A2 -0.7 +0.1 N.D. N.D. N.D.
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.2 -0.7 N.D. N.D. N.D.
metal limitation Lactate; aerobic; with copper, sample2 -0.6 +0.1 N.D. N.D. N.D.
stress Cisplatin 0.003 mg/ml +0.2 -0.6 N.D. N.D. N.D.
RCH2 grown on a colony of N2A2 -0.5 +0.2 N.D. N.D. N.D.
RCH2 grown on a colony of N2F3 -0.5 +0.3 N.D. N.D. N.D.
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample2 -0.3 +0.4 N.D. N.D. N.D.
anaerobic Nitrate/ lactate media with Nitrate 250mM -0.3 +0.4 N.D. N.D. N.D.
stress D-Cycloserine 0.032 mg/ml +0.4 -0.3 N.D. N.D. N.D.
stress Cephalothin 0.04 mg/ml -0.5 +0.6 N.D. N.D. N.D.
stress nitrate 250 mM -0.4 +0.6 N.D. N.D. N.D.
stress Def Carbenicillin 0.008 mg/ml -0.4 +0.6 N.D. N.D. N.D.
stress Cobalt chloride 0.08 mM +0.5 -0.3 N.D. N.D. N.D.
RCH2 grown on a colony of Serratia +0.5 -0.3 N.D. N.D. N.D.
nutrient L-tyrosine -0.3 +0.6 N.D. N.D. N.D.
carbon source RCH2 defined media -0.3 +0.6 N.D. N.D. N.D.
stress Fusidic 0.016 mg/ml -0.3 +0.7 N.D. N.D. N.D.
stress Def 2-Furfuraldehyde 0.032 vol% -0.1 +0.7 N.D. N.D. N.D.
RCH2 grown on a colony of N2F3 +0.3 +0.4 N.D. N.D. N.D.
stress Choline chloride 90 mM +0.3 +0.4 N.D. N.D. N.D.
stress Aluminum chloride 0.3 mM +0.4 +0.3 N.D. N.D. N.D.
stress Def Chlorate 40 mM +0.4 +0.3 N.D. N.D. N.D.
radiation Ionizing radiation, 319.06 Gy, +0.3 +0.5 N.D. N.D. N.D.
stress Def Benzethonium chloride 0.008 mM +0.1 +0.8 N.D. N.D. N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml +0.1 +1.0 N.D. N.D. N.D.
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