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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1727 and Psest_1728 are separated by 242 nucleotides
Psest_1728 and Psest_1729 are separated by 12 nucleotides
Psest_1729 and Psest_1730 are separated by 40 nucleotides
Psest_1730 and Psest_1731 are separated by 1 nucleotides
Psest_1727: Psest_1727 - Flagellar hook-length control protein, at 1,833,221 to 1,834,462
_1727
Psest_1728: Psest_1728 - Flagellar basal body-associated protein, at 1,834,705 to 1,835,238
_1728
Psest_1729: Psest_1729 - flagellar motor switch protein FliM, at 1,835,251 to 1,836,222
_1729
Psest_1730: Psest_1730 - flagellar motor switch protein FliN, at 1,836,263 to 1,836,736
_1730
Psest_1731: Psest_1731 - flagellar biosynthetic protein FliO, at 1,836,738 to 1,837,157
_1731
Group
Condition
Psest
_1727
Psest
_1728
Psest
_1729
Psest
_1730
Psest
_1731
stress
Nalidixic 0.00390625 mg/ml
N.D.
-0.6
-0.5
N.D.
-2.6
carbon source
L-Proline (C)
N.D.
-1.0
-1.4
N.D.
-1.0
carbon source
L-Proline (C)
N.D.
-0.9
-1.0
N.D.
-1.4
carbon source
L-Proline (C)
N.D.
-1.0
-1.5
N.D.
-0.4
stress
Vancomycin 0.016 mg/ml
N.D.
+0.4
+1.3
N.D.
+1.4
carbon source
D-Gluconic Acid (C)
N.D.
+1.3
+1.3
N.D.
+0.6
carbon source
D-Gluconic Acid (C)
N.D.
+0.7
+1.3
N.D.
+1.1
stress
Gentamicin 0.0016 mg/ml
N.D.
+0.6
+1.3
N.D.
+1.2
RCH2 grown on a colony of 8R2A
N.D.
-0.2
+0.9
N.D.
+2.6
carbon source
Ethanol (C)
N.D.
+1.0
+1.2
N.D.
+1.7
nitrogen source
L-Isoleucine (N)
N.D.
+0.5
+1.5
N.D.
+2.1
stress
Cephalothin 0.04 mg/ml
N.D.
+0.8
+1.3
N.D.
+2.0
carbon source
L-Glutamine (C)
N.D.
+1.0
+1.8
N.D.
+1.5
carbon source
Ethanol (C)
N.D.
+1.1
+1.6
N.D.
+2.0
carbon source
L-Glutamine (C)
N.D.
+1.0
+1.9
N.D.
+2.2
stress
Vancomycin 0.016 mg/ml
N.D.
+1.4
+1.9
N.D.
+2.0
carbon source
L-Glutamine (C)
N.D.
+1.3
+1.9
N.D.
+2.3
stress
Chlorite 0.06 mM
N.D.
+1.4
+1.9
N.D.
+2.2
stress
Bacitracin 0.25 mg/ml
N.D.
+2.0
+2.4
N.D.
+2.6
stress
Bacitracin 0.25 mg/ml
N.D.
+2.3
+2.9
N.D.
+3.0
nutrient
L-Histidine
N.D.
+2.8
+4.2
N.D.
+4.3
vitamin
No vitamins t1
N.D.
+3.0
+4.4
N.D.
+4.1
vitamin
With vitamins t1
N.D.
+3.2
+4.3
N.D.
+4.4
vitamin
With vitamins t2
N.D.
+3.1
+4.3
N.D.
+4.5
nutrient
Min media with glucose
N.D.
+2.9
+4.5
N.D.
+4.5
nutrient
L-Histidine
N.D.
+3.3
+4.2
N.D.
+4.4
vitamin
No vitamins t2
N.D.
+3.1
+4.8
N.D.
+4.5
nutrient
Min media with glucose
N.D.
+3.2
+5.3
N.D.
+4.9
nutrient
L-tyrosine
N.D.
+3.7
+5.5
N.D.
+6.0
nutrient
L-tyrosine
N.D.
+4.2
+5.6
N.D.
+5.6
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