Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1721 and Psest_1722 overlap by 11 nucleotidesPsest_1722 and Psest_1723 are separated by 3 nucleotidesPsest_1723 and Psest_1724 are separated by 230 nucleotidesPsest_1724 and Psest_1725 are separated by 1 nucleotides Psest_1721: Psest_1721 - Flagellar biosynthesis/type III secretory pathway protein, at 1,827,866 to 1,828,642 _1721 Psest_1722: Psest_1722 - flagellar protein export ATPase FliI, at 1,828,632 to 1,829,990 _1722 Psest_1723: Psest_1723 - flagellar export protein FliJ, at 1,829,994 to 1,830,446 _1723 Psest_1724: Psest_1724 - Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor), at 1,830,677 to 1,830,982 _1724 Psest_1725: Psest_1725 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 1,830,984 to 1,832,675 _1725
Group Condition Psest_1721 Psest_1722 Psest_1723 Psest_1724 Psest_1725
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample3 +0.3 +0.8 +1.2 -4.7 +0.6
stress Def Benzalkonium Chloride 0.002 mg/ml -1.0 -0.0 -0.3 -3.7 +3.8
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample1 +0.8 +0.9 +1.0 -4.6 +0.6
stress nitrate 250 mM -0.6 +1.3 +0.5 -3.7 +1.8
carbon source butyrate (C) +0.7 +0.8 +0.7 -4.1 +2.2
carbon source butyrate (C) +1.0 +0.9 +0.8 -4.5 +2.3
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.1 +1.0 +0.6 -3.5 +2.3
stress Gentamicin 0.0016 mg/ml +1.4 +2.1 +1.2 -5.4 +2.0
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.9 +1.2 +0.6 -3.5 +2.5
carbon source butyrate (C) +0.4 +1.6 +0.1 -4.3 +4.0
carbon source L-Glutamine (C) +1.4 +1.7 +1.3 -1.5 +1.8
carbon source L-Glutamine (C) +1.7 +1.8 +1.6 -1.9 +1.8
carbon source L-Glutamine (C) +1.9 +1.8 +1.5 -1.9 +1.8
stress Def Carbenicillin 0.008 mg/ml +0.9 +2.4 +1.1 -1.7 +2.6
stress Chlorite 0.06 mM +2.3 +2.2 +2.0 -0.1 -0.5
stress Cephalothin 0.04 mg/ml +1.5 +2.5 +1.9 -3.1 +3.8
nitrogen source nitrite (N) +0.7 +1.6 +1.4 -0.7 +4.0
stress Bacitracin 0.25 mg/ml +2.5 +3.1 +2.9 +0.4 -0.7
nitrogen source L-Isoleucine (N) +1.8 +2.0 +1.7 -0.8 +4.0
stress Bacitracin 0.25 mg/ml +3.4 +3.1 +2.8 +1.3 -0.6
vitamin With vitamins t1 +3.8 +4.1 +3.6 -0.5 -0.6
vitamin With vitamins t2 +4.0 +4.2 +3.8 +0.0 -0.4
nutrient Min media with glucose +4.3 +4.3 +3.8 -0.2 -0.5
vitamin No vitamins t1 +3.9 +4.2 +4.3 +0.6 -0.7
vitamin No vitamins t2 +4.3 +4.5 +4.7 -0.2 -0.6
nutrient L-Histidine +4.6 +4.0 +3.7 +0.5 +0.1
nutrient L-Histidine +4.6 +4.6 +4.2 +0.5 +0.2
nutrient Min media with glucose +5.0 +4.6 +4.5 +0.8 -0.6
nutrient L-tyrosine +5.7 +5.3 +5.2 -0.5 -0.2
nutrient L-tyrosine +5.1 +5.5 +5.4 +0.1 -0.5
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