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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1703 and Psest_1704 are separated by 63 nucleotides
Psest_1704 and Psest_1705 are separated by 330 nucleotides
Psest_1705 and Psest_1706 are separated by 0 nucleotides
Psest_1706 and Psest_1707 are separated by 125 nucleotides
Psest_1703: Psest_1703 - Uncharacterized protein conserved in bacteria, at 1,808,965 to 1,809,531
_1703
Psest_1704: Psest_1704 - Dehydrogenases (flavoproteins), at 1,809,595 to 1,811,250
_1704
Psest_1705: Psest_1705 - Electron transfer flavoprotein, beta subunit, at 1,811,581 to 1,812,330
_1705
Psest_1706: Psest_1706 - Electron transfer flavoprotein, alpha subunit, at 1,812,331 to 1,813,260
_1706
Psest_1707: Psest_1707 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 1,813,386 to 1,814,207
_1707
Group
Condition
Psest
_1703
Psest
_1704
Psest
_1705
Psest
_1706
Psest
_1707
temperature
LB 30C timecourse1 timepoint 3
-0.3
-4.1
N.D.
N.D.
-0.6
temperature
Glucose defined media 26C sample1
-0.0
-4.5
N.D.
N.D.
-0.0
temperature
Glucose defined 30C timecourse1 timepoint 2
-0.1
-3.9
N.D.
N.D.
-0.1
carbon source
Glucose defined media
-0.1
-3.7
N.D.
N.D.
-0.2
carbon source
butyrate (C)
-1.6
-1.6
N.D.
N.D.
-0.8
carbon source
butyrate (C)
-1.6
-1.7
N.D.
N.D.
-0.6
carbon source
L-Proline (C)
-0.0
-3.8
N.D.
N.D.
-0.0
temperature
Glucose defined 30C timecourse1 timepoint 3
-0.1
-3.5
N.D.
N.D.
-0.2
temperature
LB 30C timecourse1 timepoint 2
+0.1
-3.5
N.D.
N.D.
-0.4
temperature
Glucose defined 30C timecourse1 timepoint 1
-0.1
-3.3
N.D.
N.D.
-0.1
carbon source
L-Asparagine (C)
-0.0
-3.4
N.D.
N.D.
-0.0
stress
Gentamicin 0.0016 mg/ml
+0.0
-3.0
N.D.
N.D.
-0.2
carbon source
L-Lactate (C)
+0.2
-3.4
N.D.
N.D.
-0.1
temperature
Glucose defined media 37C sample1
+0.0
-3.0
N.D.
N.D.
-0.1
stress
Cobalt chloride 0.06 mM
-0.2
-3.3
N.D.
N.D.
+0.4
carbon source
Glucose defined media
-0.2
-2.9
N.D.
N.D.
-0.0
stress
Nickel (II) chloride 0.8 mM
-0.4
-2.7
N.D.
N.D.
+0.0
carbon source
L-Leucine (C)
-0.2
-2.4
N.D.
N.D.
-0.3
carbon source
butyrate (C)
-1.9
-0.2
N.D.
N.D.
-0.8
stress
Def Cephalothin 0.04 mg/ml
-0.0
-2.5
N.D.
N.D.
-0.3
carbon source
RCH2 defined media
+0.1
-2.8
N.D.
N.D.
+0.1
stress
sodium fluoride 6.25 mM
-0.1
-2.7
N.D.
N.D.
+0.3
stress
Def Carbenicillin 0.02 mg/ml
-0.5
+2.1
N.D.
N.D.
-0.6
stress
Bacitracin 0.25 mg/ml
+0.2
+2.3
N.D.
N.D.
-0.3
stress
Furfuryl Alcohol 0.05 vol%
-0.4
+2.8
N.D.
N.D.
+0.3
stress
Cephalothin 0.04 mg/ml
+0.2
+3.4
N.D.
N.D.
+0.5
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.8
+3.6
N.D.
N.D.
-0.0
carbon source
propionate (C)
-0.2
+4.1
N.D.
N.D.
+0.9
carbon source
propionate (C)
+0.2
+5.5
N.D.
N.D.
-0.2
stress
A22 0.005 mg/ml
-0.1
+7.0
N.D.
N.D.
-1.1
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