Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1699 and Psest_1700 are separated by 75 nucleotidesPsest_1700 and Psest_1701 are separated by 31 nucleotidesPsest_1701 and Psest_1702 are separated by 120 nucleotidesPsest_1702 and Psest_1703 are separated by 53 nucleotides Psest_1699: Psest_1699 - Selenocysteine lyase, at 1,805,422 to 1,806,555 _1699 Psest_1700: Psest_1700 - Transcriptional regulator, at 1,806,631 to 1,807,251 _1700 Psest_1701: Psest_1701 - Fe-S oxidoreductase, at 1,807,283 to 1,808,179 _1701 Psest_1702: Psest_1702 - hypothetical protein, at 1,808,300 to 1,808,911 _1702 Psest_1703: Psest_1703 - Uncharacterized protein conserved in bacteria, at 1,808,965 to 1,809,531 _1703
Group Condition Psest_1699 Psest_1700 Psest_1701 Psest_1702 Psest_1703
stress Gentamicin 0.0016 mg/ml -0.4 -3.5 -0.3 +0.1 +0.0
stress Def Carbenicillin 0.02 mg/ml -1.0 -0.7 -0.4 -0.4 -0.5
stress Def Chloride 400 mM -0.0 -2.7 +0.0 -0.1 -0.2
stress nitrate 250 mM -0.5 -2.3 -0.7 +0.4 +0.3
stress Chlorate 75 mM -1.1 -0.4 -1.0 -0.2 +0.1
temperature LB 30C timecourse1 timepoint 3 -0.4 -1.1 -0.4 -0.3 -0.3
stress Nickel (II) chloride 0.8 mM -0.0 -1.5 -0.0 -0.2 -0.4
stress Nickel (II) chloride 1 mM -0.5 -0.7 -0.2 -0.3 -0.4
stress Lactate-nitrate; anaerobic; copper stress sample1 -0.8 -0.6 -0.5 +0.0 -0.1
stress Def Carbenicillin 0.008 mg/ml -0.6 -0.7 -0.9 -0.0 +0.2
stress Fusidic 0.016 mg/ml -0.5 -1.1 -0.2 -0.3 +0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -1.0 -0.8 +0.4 +0.3 -0.7
stress Benzethonium chloride 0.01 mM -0.0 -1.7 -0.5 +0.2 +0.1
metal limitation Lactate-nitrite; anaerobic; sample3 -0.5 -1.0 -0.4 +0.1 -0.0
stress 1-ethyl-3-methylimidazolium acetate 40 mM -0.7 -1.2 +0.4 -0.2 -0.0
stress Benzethonium chloride 0.01 mM -0.4 -0.6 -0.6 +0.4 -0.3
metal limitation Lactate-nitrite with YE; anaerobic; with copper; sample1 +0.2 -1.2 -0.4 +0.1 -0.1
metal limitation Lactate-nitrite with YE; anaerobic; sample2 +0.1 -1.2 -0.6 +0.1 +0.1
stress Lactate-nitrate; anaerobic; copper stress sample3 +0.5 -0.8 -0.6 -0.1 -0.2
stress Chloride 200 mM -1.2 +0.6 -0.2 -0.2 -0.0
radiation Ionizing radiation, 319.06 Gy, +0.4 -1.6 +0.0 +0.1 +0.1
stress sodium fluoride 8.5 mM -0.0 -1.5 +0.3 +0.1 +0.3
stress Def 2-Furfuraldehyde 0.032 vol% -2.0 -0.1 +0.4 +0.1 +0.8
carbon source L-tyrosine (C) -0.8 +0.9 -0.2 +0.3 +0.1
carbon source propionate (C) -1.0 +2.2 +0.1 -0.3 +0.2
stress Def Benzalkonium Chloride 0.002 mg/ml -0.5 +0.6 +0.0 +0.4 +0.8
stress Polymyxin B sulfate 0.0001 mg/ml +0.7 +1.2 +0.0 +0.1 +0.1
carbon source butyrate (C) -0.6 +8.9 -0.0 -0.2 -1.6
carbon source butyrate (C) -1.0 +10.1 -0.0 -0.2 -1.6
carbon source butyrate (C) -0.3 +10.9 -0.3 +0.2 -1.9
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