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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1645 and Psest_1646 overlap by 23 nucleotides
Psest_1646 and Psest_1647 are separated by 177 nucleotides
Psest_1647 and Psest_1648 are separated by 99 nucleotides
Psest_1648 and Psest_1649 are separated by 79 nucleotides
Psest_1645: Psest_1645 - hypothetical protein, at 1,749,090 to 1,749,323
_1645
Psest_1646: Psest_1646 - Predicted ICC-like phosphoesterases, at 1,749,301 to 1,749,990
_1646
Psest_1647: Psest_1647 - Lhr-like helicases, at 1,750,168 to 1,752,759
_1647
Psest_1648: Psest_1648 - ATP-dependent DNA ligase, at 1,752,859 to 1,754,568
_1648
Psest_1649: Psest_1649 - Predicted exonuclease of the beta-lactamase fold involved in RNA processing, at 1,754,648 to 1,755,661
_1649
Group
Condition
Psest
_1645
Psest
_1646
Psest
_1647
Psest
_1648
Psest
_1649
stress
Def Benzalkonium Chloride 0.002 mg/ml
N.D.
-0.1
-1.7
-0.5
-0.2
stress
Def Carbenicillin 0.008 mg/ml
N.D.
+0.1
-1.2
-0.7
-0.4
stress
Cobalt chloride 0.07 mM
N.D.
-0.2
-1.5
-0.3
-0.1
stress
Def A22 0.015 mg/ml
N.D.
-0.3
-0.7
-0.7
-0.4
nitrogen source
nitrate (N)
N.D.
-0.4
-0.7
-0.7
-0.2
stress
Def Cisplatin 0.0002 mg/ml
N.D.
-0.3
-0.6
-0.4
-0.5
stress
Def Lomefloxacin 0.00004 mM
N.D.
-0.7
-0.5
-0.3
-0.4
stress
Thallium(I) acetate 0.1 mg/ml
N.D.
-0.1
-1.3
-0.1
-0.1
stress
Benzalkonium Chloride 0.002 mg/ml
N.D.
-0.2
-0.7
-0.4
-0.3
stress
Paraquat dichloride 0.015 mg/ml
N.D.
-0.7
-0.7
-0.2
+0.1
nitrogen source
L-Alanine (N)
N.D.
-0.5
-0.4
-0.3
-0.3
stress
Nickel (II) chloride 0.9 mM
N.D.
+0.1
-0.9
-0.3
-0.4
stress
Def 5-Hydroxymethylfurfural 5 mM
N.D.
-0.1
-0.9
-0.3
-0.1
nitrogen source
Glycine (N)
N.D.
-0.6
-0.8
+0.0
-0.0
carbon source
L-Asparagine (C)
N.D.
-0.0
-0.9
-0.3
-0.1
lb
LB
N.D.
-0.5
+0.1
-0.2
-0.6
stress
Def 2-Furfuraldehyde 0.032 vol%
N.D.
+0.2
-1.3
-0.2
+0.0
stress
Cisplatin 0.0016 mg/ml
N.D.
+0.1
-1.4
+0.4
-0.1
stress
Lactate-nitrate; anaerobic; nickel stress sample2
N.D.
-0.3
-0.7
+0.3
-0.3
stress
acetate 80 mM
N.D.
+0.2
-0.9
-0.2
+0.0
stress
Zinc 0.12 mM
N.D.
+0.3
-0.7
-0.2
-0.3
stress
Def Carbenicillin 0.02 mg/ml
N.D.
+0.1
-0.8
+0.2
-0.4
nutrient
L-tyrosine
N.D.
+0.1
-1.3
+0.2
+0.1
RCH2 grown on a colony of Serratia
N.D.
-0.1
-1.0
+0.2
+0.1
nitrogen source
Putrescine (N)
N.D.
-0.0
-1.0
+0.4
+0.2
stress
Benzethonium chloride 0.0125 mM
N.D.
+0.9
+0.0
-0.3
-0.1
stress
Aluminum chloride 0.3 mM
N.D.
+0.3
+0.7
-0.3
-0.2
RCH2 grown on a colony of N2C3
N.D.
-0.7
+1.3
+0.5
-0.4
carbon source
propionate (C)
N.D.
+0.0
+1.1
-0.2
+0.1
stress
2-Furfuraldehyde 0.05 vol%
N.D.
+0.6
+0.5
+0.1
-0.1
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