Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1621 and Psest_1622 are separated by 9 nucleotidesPsest_1622 and Psest_1623 are separated by 94 nucleotidesPsest_1623 and Psest_1624 are separated by 28 nucleotidesPsest_1624 and Psest_1625 are separated by 57 nucleotides Psest_1621: Psest_1621 - Uncharacterized protein conserved in bacteria, at 1,725,084 to 1,726,214 _1621 Psest_1622: Psest_1622 - hypothetical protein, at 1,726,224 to 1,726,646 _1622 Psest_1623: Psest_1623 - Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family, at 1,726,741 to 1,727,295 _1623 Psest_1624: Psest_1624 - Transcriptional regulator, at 1,727,324 to 1,728,232 _1624 Psest_1625: Psest_1625 - hypothetical protein, at 1,728,290 to 1,728,610 _1625
Group Condition Psest_1621 Psest_1622 Psest_1623 Psest_1624 Psest_1625
nitrogen source nitrite (N) +0.2 -4.8 -1.3 +0.1 +0.8
nitrogen source nitrite (N) +0.0 -3.8 -1.7 -0.1 +1.2
nitrogen source nitrite (N) -0.1 -4.3 -1.3 -0.3 +1.9
nitrogen source nitrite (N) -0.2 -3.6 -1.1 -0.7 +2.5
carbon source Anaerobic, Glucose Nitrate sample3 +0.1 -0.5 -0.7 -0.2 -1.6
anaerobic Nitrite/ lactate media with Nitrite 20mM -0.2 -1.1 -0.6 +0.2 -0.5
stress Nalidixic 0.00390625 mg/ml -0.1 -1.1 +0.3 -0.2 -0.9
stress Furfuryl Alcohol 0.05 vol% +0.2 -0.9 +0.7 +0.0 -2.0
stress nitrite 2.5 mM +0.0 -1.8 -0.5 +0.1 +0.5
stress Bacitracin 0.25 mg/ml +0.1 -1.5 +0.4 +0.1 -0.5
stress methylglyoxal 0.0016 vol% +0.1 -1.4 +0.2 +0.4 -0.7
stress nitrite 2.5 mM -0.4 -1.4 +0.3 -0.4 +0.8
stress nitrite 2.5 mM -0.4 -1.4 +0.2 -0.3 +1.0
carbon source propionate (C) +0.1 +0.3 +0.8 +0.3 -2.2
stress Carbenicillin 0.0065 mg/ml -0.2 +0.8 -0.6 +0.3 -0.8
RCH2 grown on a colony of N2C3 +0.6 +0.7 +0.1 -0.4 -1.4
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.0 +0.1 -1.2 -0.1 +1.4
RCH2 grown on a colony of Serratia +0.4 +0.4 +0.3 +0.7 -1.5
nitrogen source L-Isoleucine (N) -0.1 -0.6 -0.1 -0.4 +1.5
carbon source Ethanol (C) -0.1 +0.0 -0.7 -0.2 +1.7
RCH2 grown on a colony of N2A2 +0.5 +0.0 -0.5 -0.5 +1.7
RCH2 grown on a colony of 8R2A -0.2 +0.7 -0.3 -0.1 +1.5
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.0 +0.2 -0.4 -0.2 +2.1
radiation Ionizing radiation, 319.06 Gy, +0.1 +0.7 -0.2 -0.1 +1.6
carbon source L-tyrosine (C) +0.3 +0.2 -0.7 -0.6 +2.9
nitrogen source L-Valine (N) -0.1 +0.1 +0.0 -0.1 +2.3
radiation Ionizing radiation, 319.06 Gy, -0.0 +0.3 +0.8 -0.1 +1.4
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.0 +0.4 -0.1 -0.1 +2.2
RCH2 grown on a colony of N2A2 +0.4 +0.6 +0.2 +0.3 +1.3
nitrogen source L-Valine (N) -0.2 +0.6 +0.0 +0.2 +2.4
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