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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1616 and Psest_1617 are separated by 58 nucleotides
Psest_1617 and Psest_1618 overlap by 7 nucleotides
Psest_1618 and Psest_1619 are separated by 127 nucleotides
Psest_1619 and Psest_1620 are separated by 168 nucleotides
Psest_1616: Psest_1616 - hypothetical protein, at 1,720,225 to 1,720,596
_1616
Psest_1617: Psest_1617 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 1,720,655 to 1,721,461
_1617
Psest_1618: Psest_1618 - succinyl-diaminopimelate desuccinylase, proteobacterial clade, at 1,721,455 to 1,722,603
_1618
Psest_1619: Psest_1619 - Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1, at 1,722,731 to 1,723,540
_1619
Psest_1620: Psest_1620 - Phosphate-selective porin, at 1,723,709 to 1,724,998
_1620
Group
Condition
Psest
_1616
Psest
_1617
Psest
_1618
Psest
_1619
Psest
_1620
stress
Cisplatin 0.003 mg/ml
N.D.
-1.7
N.D.
-0.8
-0.2
anaerobic
Nitrite/ lactate media with Nitrite 20mM
N.D.
-1.3
N.D.
-0.8
+0.2
nitrogen source
L-Alanine (N)
N.D.
+0.5
N.D.
-2.0
-0.2
stress
Def Chlorate 20 mM
N.D.
-1.0
N.D.
-0.8
+0.1
radiation
Ionizing radiation, 0 Gy
N.D.
-1.0
N.D.
-0.5
-0.2
stress
Choline Lysine 20 mM
N.D.
-0.6
N.D.
-0.9
-0.1
anaerobic
Nitrite/ lactate media with Nitrite 20mM
N.D.
-1.7
N.D.
+0.3
-0.1
stress
Def 2-Furfuraldehyde 0.032 vol%
N.D.
-0.6
N.D.
-1.0
+0.1
stress
Benzethonium chloride 0.0125 mM
N.D.
-1.6
N.D.
+0.3
-0.1
nitrogen source
L-Alanine (N)
N.D.
+0.9
N.D.
-2.1
+0.1
stress
Nalidixic 0.00390625 mg/ml
N.D.
+0.3
N.D.
-0.7
-0.6
stress
Carbenicillin 0.0065 mg/ml
N.D.
-1.2
N.D.
+0.4
-0.2
lb
LB
N.D.
-1.1
N.D.
+0.5
-0.0
nitrogen source
L-Valine (N)
N.D.
+0.6
N.D.
-1.4
+0.2
stress
Fusidic 0.016 mg/ml
N.D.
-1.1
N.D.
+0.1
+0.5
radiation
Ionizing radiation, 319.06 Gy,
N.D.
+0.6
N.D.
-1.0
+0.0
stress
nitrate 200 mM
N.D.
-0.9
N.D.
+0.6
-0.0
stress
Nalidixic 0.00390625 mg/ml
N.D.
+0.4
N.D.
-0.9
+0.5
stress
5-Hydroxymethylfurfural 5 mM
N.D.
+0.9
N.D.
-0.7
+0.1
stress
syringaldehyde 4 mM
N.D.
+1.4
N.D.
-0.9
-0.0
nitrogen source
L-Citrulline (N)
N.D.
+0.9
N.D.
-0.5
+0.2
carbon source
L-tyrosine (C)
N.D.
-0.6
N.D.
+1.0
+0.3
stress
Paraquat dichloride 0.015 mg/ml
N.D.
+0.6
N.D.
+0.9
-0.4
RCH2 grown on a colony of Serratia
N.D.
+1.4
N.D.
-0.4
+0.1
stress
A22 0.005 mg/ml
N.D.
+0.8
N.D.
+0.6
-0.2
stress
nitrate 200 mM
N.D.
+0.9
N.D.
+0.7
-0.1
stress
Thallium(I) acetate 0.09 mg/ml
N.D.
+1.2
N.D.
+0.3
+0.1
stress
Chlorate 75 mM
N.D.
+0.3
N.D.
+1.2
+0.4
RCH2 grown on a colony of N2C3
N.D.
+1.2
N.D.
+0.4
+0.2
RCH2 grown on a colony of Serratia
N.D.
+1.5
N.D.
+0.6
+0.4
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