Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1589 and Psest_1590 are separated by 11 nucleotidesPsest_1590 and Psest_1591 are separated by 196 nucleotidesPsest_1591 and Psest_1592 overlap by 4 nucleotidesPsest_1592 and Psest_1593 are separated by 10 nucleotides Psest_1589: Psest_1589 - hypothetical protein, at 1,693,868 to 1,694,185 _1589 Psest_1590: Psest_1590 - copper-resistance protein, CopA family, at 1,694,197 to 1,695,975 _1590 Psest_1591: Psest_1591 - hypothetical protein, at 1,696,172 to 1,696,828 _1591 Psest_1592: Psest_1592 - hypothetical protein, at 1,696,825 to 1,697,379 _1592 Psest_1593: Psest_1593 - hypothetical protein, at 1,697,390 to 1,697,740 _1593
Group Condition Psest_1589 Psest_1590 Psest_1591 Psest_1592 Psest_1593
vitamin With vitamins t1 N.D. -0.3 -0.6 -1.2 -0.1
stress Def 2-Furfuraldehyde 0.032 vol% N.D. -0.2 -0.5 -0.8 -0.4
RCH2 grown on a colony of N2C3 N.D. -0.2 +0.1 -1.4 -0.0
carbon source L-tyrosine (C) N.D. -0.2 +0.2 -1.0 -0.2
RCH2 grown on a colony of 8R2A N.D. -0.3 +0.3 -0.6 -0.7
lb LB N.D. -0.1 +0.4 -0.8 -0.6
stress Benzethonium chloride 0.0125 mM N.D. +0.1 +0.0 -0.2 -0.9
stress 1-ethyl-3-methylimidazolium acetate 40 mM N.D. -0.1 +0.3 -0.3 -0.6
RCH2 grown on a colony of N2F3 N.D. -0.2 +0.6 -1.3 +0.3
carbon source propionate (C) N.D. +0.4 +0.7 -0.7 -0.7
stress Lactate-nitrate; anaerobic; nickel stress sample2 N.D. -0.0 -0.4 +0.6 -0.4
anaerobic Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten N.D. +0.0 +0.2 -0.8 +0.4
stress Lactate-nitrate; anaerobic; copper stress sample2 N.D. +0.1 +0.2 +0.8 -0.8
stress perchlorate 12.5 mM N.D. +0.1 -0.6 +0.9 -0.1
lb LB N.D. -0.1 +0.5 -0.5 +0.4
stress Neomycin 0.004 mg/ml N.D. -0.1 -0.5 +0.1 +0.8
stress Spectinomycin 0.00625 mg/ml N.D. -0.2 +0.4 +0.6 -0.4
stress Cephalothin 0.04 mg/ml N.D. +0.3 -0.2 +0.6 -0.3
vitamin No vitamins t1 N.D. -0.2 +0.5 -0.3 +0.4
stress Furfuryl Alcohol 0.05 vol% N.D. -0.4 -0.3 +1.1 +0.0
stress 2-Furfuraldehyde 0.05 vol% N.D. +0.2 -0.3 +0.7 -0.1
stress Def Carbenicillin 0.02 mg/ml N.D. +0.0 +0.2 -0.6 +1.0
stress nitrate 250 mM N.D. -0.2 -0.3 +0.5 +0.6
stress Polymyxin B sulfate 0.0001 mg/ml N.D. -0.3 +0.7 +0.5 -0.2
RCH2 grown on a colony of Serratia N.D. -0.0 -0.2 +0.6 +0.6
radiation Ionizing radiation, 319.06 Gy, N.D. -0.1 +0.3 +0.8 +0.0
nitrogen source nitrite (N) N.D. -0.2 +0.3 +0.6 +0.4
stress A22 0.002 mg/ml N.D. -0.0 +0.3 +0.5 +0.6
stress 2-Furfuraldehyde 0.05 vol% N.D. +0.0 +0.3 +1.1 -0.0
stress 5-Hydroxymethylfurfural 5 mM N.D. +0.5 +0.5 +0.6 -0.1
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