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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1573 and Psest_1574 are separated by 132 nucleotides
Psest_1574 and Psest_1575 are separated by 100 nucleotides
Psest_1575 and Psest_1576 are separated by 129 nucleotides
Psest_1576 and Psest_1577 are separated by 10 nucleotides
Psest_1573: Psest_1573 - Putative effector of murein hydrolase, at 1,675,570 to 1,676,280
_1573
Psest_1574: Psest_1574 - phenazine biosynthesis protein PhzF family, at 1,676,413 to 1,677,204
_1574
Psest_1575: Psest_1575 - Beta-glucosidase-related glycosidases, at 1,677,305 to 1,679,596
_1575
Psest_1576: Psest_1576 - Periplasmic glucans biosynthesis protein, at 1,679,726 to 1,681,297
_1576
Psest_1577: Psest_1577 - Membrane glycosyltransferase, at 1,681,308 to 1,683,866
_1577
Group
Condition
Psest
_1573
Psest
_1574
Psest
_1575
Psest
_1576
Psest
_1577
nitrogen source
L-Isoleucine (N)
N.D.
-0.8
-0.8
-1.5
-0.5
stress
sodium fluoride 8.5 mM
N.D.
-3.0
+0.0
+0.1
+0.1
stress
benzoic 0.4 mg/ml
N.D.
-1.4
-0.5
-0.1
-0.0
stress
A22 0.005 mg/ml
N.D.
-1.4
-0.2
-0.2
-0.1
stress
D-Cycloserine 0.032 mg/ml
N.D.
-1.6
+0.1
+0.1
-0.5
RCH2 grown on a colony of N2F3
N.D.
-1.5
+0.5
-0.8
-0.1
stress
sodium fluoride 6.25 mM
N.D.
-0.8
-0.5
-0.1
-0.3
temperature
LB 30C timecourse2 timepoint 1
N.D.
-1.7
+0.2
-0.2
+0.0
stress
Choline chloride 90 mM
N.D.
-1.3
-0.4
+0.2
-0.0
anaerobic
nitrate reduction - anaerobic
N.D.
-1.0
-0.2
-0.4
-0.0
carbon source
L-tyrosine (C)
N.D.
-0.9
+0.2
-0.4
-0.3
stress
Furfuryl Alcohol 0.2 vol%
N.D.
-1.4
+0.1
-0.1
+0.1
stress
Paraquat dichloride 0.015 mg/ml
N.D.
-1.1
-0.6
+0.4
-0.0
stress
Def 2-Furfuraldehyde 0.032 vol%
N.D.
-0.8
-0.0
-0.7
+0.3
nitrogen source
nitrite (N)
N.D.
+0.4
-0.4
-1.2
+0.1
nutrient
L-Histidine
N.D.
-1.2
-0.0
+0.3
-0.0
lb
LB
N.D.
-1.0
-0.1
+0.5
+0.0
stress
methylglyoxal 0.0016 vol%
N.D.
-1.0
-0.1
+0.5
-0.0
stress
Def Vancomycin 0.016 mg/ml
N.D.
-1.3
-0.1
+0.7
+0.1
stress
Paraquat dichloride 0.015 mg/ml
N.D.
+1.0
-0.4
-0.2
-0.1
stress
benzoic 0.4 mg/ml
N.D.
-0.6
+0.4
+0.4
+0.2
stress
Def Carbenicillin 0.008 mg/ml
N.D.
-0.3
+0.9
-0.2
+0.3
stress
perchlorate 25 mM
N.D.
+0.7
-0.1
+0.5
-0.3
RCH2 grown on a colony of 8R2A
N.D.
+1.3
+0.1
-0.4
+0.1
stress
perchlorate 25 mM
N.D.
-0.4
+0.7
+0.6
+0.3
nitrogen source
L-Alanine (N)
N.D.
+0.7
+0.1
+0.5
+0.4
stress
Def Lomefloxacin 0.00004 mM
N.D.
+0.6
+0.3
+0.6
+0.3
stress
Def Carbenicillin 0.02 mg/ml
N.D.
+0.2
+0.7
+0.3
+0.5
stress
Chlorate 75 mM
N.D.
-0.3
+0.3
+1.3
+0.7
nitrogen source
L-Glutamine (N)
N.D.
+1.1
+0.2
+0.5
+0.4
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