Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_1560 and Psest_1561 are separated by 11 nucleotidesPsest_1561 and Psest_1562 are separated by 73 nucleotidesPsest_1562 and Psest_1563 are separated by 63 nucleotidesPsest_1563 and Psest_1564 are separated by 33 nucleotides Psest_1560: Psest_1560 - hypothetical protein, at 1,661,131 to 1,661,475 _1560 Psest_1561: Psest_1561 - Uncharacterized conserved protein, at 1,661,487 to 1,662,347 _1561 Psest_1562: Psest_1562 - Uncharacterized protein conserved in bacteria, at 1,662,421 to 1,663,113 _1562 Psest_1563: Psest_1563 - Protein of unknown function (DUF548)., at 1,663,177 to 1,663,953 _1563 Psest_1564: Psest_1564 - Transcriptional regulator, at 1,663,987 to 1,664,622 _1564
Group Condition Psest_1560 Psest_1561 Psest_1562 Psest_1563 Psest_1564
RCH2 grown on a colony of 8R2A +0.4 -0.2 -0.7 -5.6 N.D.
stress nitrate 250 mM -0.9 +0.0 -1.5 -1.4 N.D.
stress Polymyxin B sulfate 0.0001 mg/ml -1.3 -0.7 -1.1 -0.4 N.D.
nitrogen source L-Isoleucine (N) -0.6 -0.5 -1.4 -0.9 N.D.
stress sodium fluoride 6.25 mM -0.4 -0.6 -1.0 -1.2 N.D.
stress Bacitracin 0.25 mg/ml -0.5 -0.5 -1.4 -0.5 N.D.
stress nitrite 2.5 mM -0.4 -0.1 -1.3 -1.2 N.D.
stress Chloride 200 mM -0.4 -0.2 -1.7 -0.5 N.D.
lb LB -0.3 -0.3 -0.7 -1.5 N.D.
stress Lomefloxacin 0.0001 mM +0.0 -0.1 -0.8 -1.5 N.D.
stress Nalidixic 0.00390625 mg/ml -0.1 +0.4 -0.3 -2.4 N.D.
stress Gentamicin 0.0016 mg/ml -0.2 +0.1 -0.3 -1.8 N.D.
stress methylglyoxal 0.0016 vol% +0.3 -0.0 -1.4 -0.9 N.D.
carbon source L-tyrosine (C) -0.2 +0.3 -1.0 -0.9 N.D.
stress Paraquat dichloride 0.015 mg/ml -0.3 -0.5 +0.4 -1.3 N.D.
stress Cobalt chloride 0.05 mM -0.5 +0.1 +0.7 -1.8 N.D.
stress Nalidixic 0.00390625 mg/ml -1.2 +0.1 -1.5 +1.3 N.D.
RCH2 grown on a colony of N2F3 +1.0 -0.6 -0.9 -0.5 N.D.
carbon source L-tyrosine (C) +0.3 +0.5 -0.4 -1.2 N.D.
RCH2 grown on a colony of ecoli +0.8 +0.1 -1.6 +0.1 N.D.
stress Def Carbenicillin 0.008 mg/ml -0.0 +1.1 -0.6 -0.7 N.D.
nutrient Min media with glucose +0.1 +0.1 -1.3 +1.4 N.D.
nitrogen source L-Citrulline (N) -0.2 -0.1 -0.8 +1.5 N.D.
RCH2 grown on a colony of Serratia +0.5 -0.2 -1.3 +1.6 N.D.
stress Def Lomefloxacin 0.00004 mM +0.4 +0.4 +1.0 -0.6 N.D.
carbon source propionate (C) +0.7 +0.2 +0.8 +0.7 N.D.
carbon source Glucose defined media +0.5 +0.5 +1.1 +0.5 N.D.
carbon source L-Proline (C) +0.6 +0.6 +0.1 +1.3 N.D.
temperature Glucose defined 30C timecourse1 timepoint 3 +0.6 +0.4 +1.2 +0.6 N.D.
temperature LB 30C timecourse1 timepoint 2 +0.7 +0.4 +1.6 +0.9 N.D.
remove
Psest_1560
plot
remove
Psest_1561
plot
remove
Psest_1562
remove
Psest_1563
plot
remove
Psest_1564
plot