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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0149 and Psest_0150 are separated by 26 nucleotides
Psest_0150 and Psest_0151 are separated by 357 nucleotides
Psest_0151 and Psest_0152 are separated by 129 nucleotides
Psest_0152 and Psest_0153 overlap by 1 nucleotides
Psest_0149: Psest_0149 - nitrate ABC transporter, permease protein, at 148,074 to 148,943
_0149
Psest_0150: Psest_0150 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components, at 148,970 to 150,301
_0150
Psest_0151: Psest_0151 - Response regulator with putative antiterminator output domain, at 150,659 to 151,969
_0151
Psest_0152: Psest_0152 - Imidazoleglycerol-phosphate dehydratase, at 152,099 to 152,692
_0152
Psest_0153: Psest_0153 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit, at 152,692 to 153,330
_0153
Group
Condition
Psest
_0149
Psest
_0150
Psest
_0151
Psest
_0152
Psest
_0153
stress
Def Benzethonium chloride 0.008 mM
-0.3
-0.2
+0.2
-7.0
-6.9
carbon source
D-Lactate (C)
-0.0
-0.1
-0.0
-7.6
-6.2
carbon source
Fumarate (C)
-0.3
-0.1
-0.3
-6.9
-6.3
carbon source
D,L-Lactate (C)
-0.0
+0.1
+0.2
-7.4
-6.5
nitrogen source
Adenine (N)
-0.3
-0.1
+0.2
-6.4
-6.5
carbon source
L-Glutamic (C)
-0.0
-0.1
-0.0
-5.9
-6.8
carbon source
D-Alanine (C)
+0.0
-0.1
-0.3
-6.4
-6.1
carbon source
L-Asparagine (C)
+0.1
+0.1
+0.0
-7.1
-5.8
stress
Def methylglyoxal 0.01 vol%
-0.3
+0.1
+0.4
-6.6
-6.4
stress
Def Polymyxin B sulfate 0.0001 mg/ml
-0.2
-0.2
-0.0
-6.0
-6.2
carbon source
acetate (C)
-0.0
-0.1
-0.2
-6.7
-5.6
carbon source
D,L-Lactate (C)
+0.2
-0.1
+0.2
-6.7
-6.3
nitrogen source
L-Alanine (N)
+0.2
+0.1
-0.1
-7.0
-5.8
carbon source
Fumarate (C)
-0.1
-0.1
+0.3
-6.7
-5.8
carbon source
L-Lactate (C)
-0.2
+0.0
+0.3
-6.5
-6.1
carbon source
L-Glutamine (C)
+0.0
+0.2
-0.1
-6.6
-6.0
nitrogen source
Urea (N)
-0.3
+0.0
+0.2
-6.3
-6.0
carbon source
D-Glucose (C)
+0.2
+0.1
+0.0
-6.2
-6.5
carbon source
L-Glutamic (C)
-0.2
+0.1
+0.1
-6.5
-5.9
carbon source
D-Maltose (C)
+0.0
-0.0
-0.2
-6.3
-5.8
carbon source
L-Glutamine (C)
+0.0
-0.0
+0.1
-6.6
-5.9
stress
Def Cephalothin 0.04 mg/ml
-0.1
+0.2
-0.1
-6.4
-5.9
stress
Def Polymyxin B sulfate 0.00008 mg/ml
+0.0
-0.1
+0.4
-6.6
-5.9
nitrogen source
Urea (N)
+0.1
+0.2
+0.1
-6.9
-5.8
nitrogen source
Cytosine (N)
+0.2
+0.1
-0.3
-6.5
-5.7
nitrogen source
D-Alanine (N)
-0.1
+0.2
+0.1
-5.5
-6.7
carbon source
L-Lactate (C)
-0.1
+0.0
+0.3
-6.3
-5.7
nitrogen source
L-Asparagine (N)
-0.1
+0.1
+0.3
-6.2
-5.7
carbon source
D-Maltose (C)
+0.2
-0.2
+0.2
-5.3
-6.5
carbon source
RCH2 defined media
-0.1
+0.2
+0.4
-5.6
-6.1
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