Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_1538 and Psest_1539 are separated by 42 nucleotidesPsest_1539 and Psest_1540 are separated by 120 nucleotidesPsest_1540 and Psest_1541 overlap by 4 nucleotidesPsest_1541 and Psest_1542 overlap by 4 nucleotides Psest_1538: Psest_1538 - Uncharacterized protein conserved in bacteria, at 1,637,544 to 1,638,086 _1538 Psest_1539: Psest_1539 - Mn2+ and Fe2+ transporters of the NRAMP family, at 1,638,129 to 1,639,349 _1539 Psest_1540: Psest_1540 - biotin-dependent carboxylase uncharacterized domain, at 1,639,470 to 1,640,381 _1540 Psest_1541: Psest_1541 - TIGR00370 family protein, at 1,640,378 to 1,641,085 _1541 Psest_1542: Psest_1542 - Uncharacterized proteins, homologs of lactam utilization protein B, at 1,641,082 to 1,641,831 _1542
Group Condition Psest_1538 Psest_1539 Psest_1540 Psest_1541 Psest_1542
RCH2 grown on a colony of N2F3 +0.1 -3.4 -4.4 -2.9 -3.4
RCH2 grown on a colony of N2F3 +0.8 -2.1 -4.4 -3.1 -2.9
lb LB -0.9 -0.5 -5.8 -0.2 -0.5
RCH2 grown on a colony of N2C3 -0.2 -1.6 -1.1 -1.7 -1.6
stress Choline Lysine 20 mM +0.1 +0.1 -4.3 -0.5 +0.2
stress Polymyxin B sulfate 0.0001 mg/ml -0.0 -0.4 -2.8 -0.3 -0.6
nitrogen source L-Alanine (N) -0.0 -0.4 -2.0 -0.9 -0.6
RCH2 grown on a colony of Serratia -0.6 -0.6 -1.3 -0.4 -1.0
stress Fusidic 0.016 mg/ml +0.6 +0.0 -3.0 -0.3 -0.9
nitrogen source L-Alanine (N) -0.2 -0.7 -0.9 -1.1 -0.6
stress nitrate 200 mM +0.6 -0.2 -2.4 -0.5 -0.9
stress Benzethonium chloride 0.0125 mM +0.4 -0.4 -2.3 -0.6 -0.3
stress Def Benzalkonium Chloride 0.002 mg/ml +0.1 -1.3 +0.2 -1.1 -0.9
stress Cisplatin 0.003 mg/ml -0.6 -0.6 -1.2 +0.3 -0.6
stress Doxycycline hyclate 0.0002 mg/ml -0.5 -0.7 -1.2 -0.5 +0.4
anaerobic Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten +0.2 +0.1 -2.7 +0.2 -0.2
anaerobic Nitrate/ lactate media with Nitrate 250mM +0.3 -0.3 -2.5 -0.1 +0.3
stress Def Chloride 400 mM -0.4 -0.3 +1.0 -0.9 -1.1
stress Bacitracin 0.25 mg/ml -1.2 +0.3 -1.0 +0.4 +0.3
stress Vancomycin 0.016 mg/ml +0.6 +0.2 -2.2 -0.0 +0.3
stress nitrate 250 mM -0.0 -0.9 +1.2 -0.5 -0.7
stress Def 2-Furfuraldehyde 0.032 vol% -0.5 -0.8 +1.2 -0.6 -0.1
RCH2 grown on a colony of 8R2A +1.1 -0.4 +1.1 -0.6 -0.5
stress Nickel (II) chloride 0.8 mM +0.2 +0.8 -1.0 +0.9 +0.8
stress Vanillin 2 mM +0.2 +0.6 +0.9 +1.3 +0.4
stress Choline chloride 90 mM +0.0 -0.1 +2.5 +0.7 +0.8
carbon source L-Glutamine (C) +0.0 +0.9 +1.4 +0.8 +1.1
carbon source L-Glutamine (C) +0.0 +0.9 +1.2 +0.9 +1.2
carbon source L-tyrosine (C) -0.3 +0.3 +4.2 +0.1 +0.1
carbon source L-Glutamine (C) -0.1 +1.0 +1.6 +0.8 +1.3
remove
Psest_1538
plot
remove
Psest_1539
plot
remove
Psest_1540
remove
Psest_1541
plot
remove
Psest_1542
plot