Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1476 and Psest_1477 overlap by 4 nucleotidesPsest_1477 and Psest_1478 are separated by 50 nucleotidesPsest_1478 and Psest_1479 overlap by 8 nucleotidesPsest_1479 and Psest_1480 overlap by 4 nucleotides Psest_1476: Psest_1476 - Predicted permease, at 1,581,244 to 1,582,341 _1476 Psest_1477: Psest_1477 - DnaA regulatory inactivator Hda, at 1,582,338 to 1,583,042 _1477 Psest_1478: Psest_1478 - Predicted membrane protein, at 1,583,093 to 1,583,503 _1478 Psest_1479: Psest_1479 - NAD(P)H:quinone oxidoreductase, type IV, at 1,583,496 to 1,584,101 _1479 Psest_1480: Psest_1480 - arsenate reductase (glutaredoxin), at 1,584,098 to 1,584,484 _1480
Group Condition Psest_1476 Psest_1477 Psest_1478 Psest_1479 Psest_1480
stress Chlorate 75 mM -0.4 N.D. -1.2 +0.1 -2.4
stress Def Carbenicillin 0.02 mg/ml -0.4 N.D. -0.6 -1.3 -0.6
stress Def Cephalothin 0.04 mg/ml -0.2 N.D. -0.3 -1.2 -1.2
temperature LB 30C timecourse1 timepoint 3 -0.6 N.D. -0.6 -0.7 -0.9
stress Nalidixic 0.00390625 mg/ml -0.9 N.D. -0.6 -0.5 -0.7
RCH2 grown on a colony of N2A2 -0.3 N.D. +0.0 -0.6 -1.4
lb LB +0.0 N.D. -0.5 -0.5 -1.3
RCH2 grown on a colony of 8R2A +0.4 N.D. -0.7 -1.1 -0.8
stress Nickel (II) chloride 0.8 mM -0.4 N.D. -0.2 -0.7 -0.9
carbon source L-tyrosine (C) -0.6 N.D. +0.1 -1.9 +0.4
carbon source L-Lactate (C) +0.2 N.D. -0.2 -1.4 -0.6
vitamin With vitamins t2 -0.1 N.D. +0.2 -0.5 -1.7
stress Gentamicin 0.0016 mg/ml -0.1 N.D. +0.5 -2.4 -0.0
stress Fusidic 0.016 mg/ml -0.3 N.D. -0.1 +0.1 -1.7
stress Benzethonium chloride 0.0125 mM -0.8 N.D. -0.5 +0.4 -1.1
stress Def Chloride 400 mM -1.9 N.D. -0.1 -0.4 +0.7
stress Benzethonium chloride 0.01 mM -0.9 N.D. -0.2 -0.9 +0.6
RCH2 grown on a colony of Serratia -0.1 N.D. +0.6 -0.4 -1.2
stress Cobalt chloride 0.07 mM +0.2 N.D. -0.7 -1.0 +0.4
stress Phosphomycin 0.012 mg/ml +0.1 N.D. +0.3 +0.2 -1.7
stress Spectinomycin 0.00625 mg/ml -1.4 N.D. +0.1 +0.9 -0.6
stress Choline Lysine 20 mM -0.7 N.D. +0.3 -1.0 +0.4
stress Choline chloride 90 mM -0.3 N.D. +0.7 -0.6 -0.6
stress 1-ethyl-3-methylimidazolium acetate 40 mM -0.2 N.D. -0.3 -0.9 +0.8
anaerobic Nitrate/ lactate media with Nitrate 250mM +0.0 N.D. +0.2 -1.6 +0.9
carbon source L-tyrosine (C) -0.0 N.D. +0.7 -1.6 +0.6
stress Def 2-Furfuraldehyde 0.032 vol% +1.0 N.D. +1.1 -0.3 -0.6
stress L-Lysine 200 mM -0.5 N.D. +0.5 +0.4 +0.8
anaerobic nitrate reduction - anaerobic +0.6 N.D. +1.1 -0.2 +0.7
stress Def Benzalkonium Chloride 0.002 mg/ml +1.2 N.D. +1.4 +0.1 +0.3
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