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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1468 and Psest_1469 are separated by 14 nucleotides
Psest_1469 and Psest_1470 are separated by 38 nucleotides
Psest_1470 and Psest_1471 are separated by 50 nucleotides
Psest_1471 and Psest_1472 are separated by 58 nucleotides
Psest_1468: Psest_1468 - hypothetical protein, at 1,574,914 to 1,575,159
_1468
Psest_1469: Psest_1469 - hypothetical protein, at 1,575,174 to 1,575,335
_1469
Psest_1470: Psest_1470 - succinyldiaminopimelate transaminase, at 1,575,374 to 1,576,570
_1470
Psest_1471: Psest_1471 - Predicted membrane protein, at 1,576,621 to 1,577,286
_1471
Psest_1472: Psest_1472 - Protein of unknown function (DUF3108)., at 1,577,345 to 1,578,055
_1472
Group
Condition
Psest
_1468
Psest
_1469
Psest
_1470
Psest
_1471
Psest
_1472
stress
Chlorite 0.06 mM
-0.4
N.D.
-0.2
-2.0
-2.8
stress
D-Cycloserine 0.032 mg/ml
-0.3
N.D.
-1.4
-1.3
-1.2
stress
D-Cycloserine 0.032 mg/ml
-0.7
N.D.
-1.9
-0.4
-1.0
vitamin
With vitamins t2
-0.4
N.D.
-0.3
-0.5
-2.6
nutrient
Min media with glucose
-0.9
N.D.
-0.3
-0.9
-1.5
stress
Chlorate 75 mM
-0.5
N.D.
-1.1
-0.7
-1.4
stress
Aluminum chloride 0.3 mM
-0.4
N.D.
-0.3
-2.1
-0.7
stress
A22 0.002 mg/ml
+0.1
N.D.
+0.0
-2.1
-1.5
stress
Neomycin 0.004 mg/ml
-0.2
N.D.
+0.0
-2.8
-0.5
stress
Vanillin 2 mM
-0.3
N.D.
+0.2
+0.0
-3.3
stress
Nalidixic 0.001 mg/ml
-0.5
N.D.
-0.1
-0.5
-2.1
stress
Choline chloride 90 mM
+0.1
N.D.
+0.4
-1.0
-2.4
vitamin
With vitamins t1
-0.4
N.D.
-0.2
-0.8
-1.6
temperature
Glucose defined 30C timecourse1 timepoint 3
-0.1
N.D.
-0.4
-0.5
-1.8
stress
Neomycin 0.004 mg/ml
+0.1
N.D.
-0.1
-2.1
-0.8
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.3
N.D.
+0.3
+0.2
-2.9
stress
Anaerobic 500 uM Zinc chloride sample2
+0.4
N.D.
-0.0
-0.1
-2.6
stress
Thallium(I) acetate 0.09 mg/ml
-0.3
N.D.
+0.2
-1.5
-0.7
stress
Choline chloride 90 mM
+0.3
N.D.
+0.0
-0.9
-1.7
stress
Benzalkonium Chloride 0.002 mg/ml
+0.3
N.D.
+0.2
-0.2
-2.3
stress
Anaerobic 500 uM Zinc chloride sample1
+0.4
N.D.
+0.1
-0.0
-2.4
stress
Gentamicin 0.0016 mg/ml
+1.1
N.D.
-0.2
-0.1
-2.3
stress
A22 0.002 mg/ml
+0.7
N.D.
-0.2
-1.0
-1.0
stress
Def Neomycin 0.0008 mg/ml
-0.2
N.D.
-0.3
-1.2
+1.1
stress
Fusidic 0.016 mg/ml
+0.9
N.D.
+0.5
+0.1
-1.6
stress
nitrate 250 mM
+1.4
N.D.
+0.3
-1.2
-0.4
stress
Def Benzethonium chloride 0.008 mM
+1.4
N.D.
+0.3
+0.1
-1.6
stress
Lactate-nitrate; anaerobic; nickel stress sample1
+0.7
N.D.
+0.8
+0.1
-1.3
stress
Def Vancomycin 0.016 mg/ml
+0.0
N.D.
+0.5
+1.1
+3.0
stress
Def Benzalkonium Chloride 0.002 mg/ml
+1.3
N.D.
+1.6
+1.1
+1.6
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