Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1463 and Psest_1464 overlap by 4 nucleotidesPsest_1464 and Psest_1465 are separated by 75 nucleotidesPsest_1465 and Psest_1466 are separated by 43 nucleotidesPsest_1466 and Psest_1467 are separated by 130 nucleotides Psest_1463: Psest_1463 - SufE protein probably involved in Fe-S center assembly, at 1,571,176 to 1,571,598 _1463 Psest_1464: Psest_1464 - Selenocysteine lyase, at 1,571,595 to 1,572,800 _1464 Psest_1465: Psest_1465 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 1,572,876 to 1,573,910 _1465 Psest_1466: Psest_1466 - transcriptional regulator, Spx/MgsR family, at 1,573,954 to 1,574,325 _1466 Psest_1467: Psest_1467 - Thioredoxin., at 1,574,456 to 1,574,881 _1467
Group Condition Psest_1463 Psest_1464 Psest_1465 Psest_1466 Psest_1467
stress 2-Furfuraldehyde 0.05 vol% -5.4 -0.3 N.D. +0.6 -0.3
nitrogen source L-Alanine (N) -2.4 -2.2 N.D. -0.0 -0.1
nitrogen source L-Valine (N) -2.0 -1.0 N.D. -1.3 -0.5
nitrogen source L-Alanine (N) -1.7 -2.1 N.D. -0.5 -0.2
carbon source propionate (C) -3.6 -0.1 N.D. -0.4 -0.2
nitrogen source L-Valine (N) -2.0 -1.3 N.D. -0.5 -0.4
stress D-Cycloserine 0.032 mg/ml -1.9 +0.2 N.D. -2.2 -0.2
RCH2 grown on a colony of N2A2 -2.7 +0.3 N.D. -1.3 +0.1
nutrient L-tyrosine -2.9 -0.3 N.D. -0.2 -0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -1.2 -0.2 N.D. -1.9 -0.2
stress Def Carbenicillin 0.02 mg/ml -2.1 -0.6 N.D. -0.3 -0.4
carbon source L-Alanine (C) -1.8 -0.7 N.D. -0.4 +0.0
nutrient L-tyrosine -2.8 -0.2 N.D. -0.1 +0.2
stress Paraquat dichloride 0.015 mg/ml -2.0 +0.4 N.D. -0.9 -0.3
stress nitrite 2.5 mM -1.5 +0.1 N.D. -1.4 -0.1
stress Nickel (II) chloride 0.9 mM -3.0 -0.6 N.D. +0.8 -0.0
stress A22 0.002 mg/ml -1.7 +0.2 N.D. -0.9 -0.3
stress Nickel (II) chloride 1 mM -2.1 -0.8 N.D. +0.5 -0.0
stress Nalidixic 0.00390625 mg/ml -0.4 +0.4 N.D. -1.7 -0.5
stress Choline Lysine 20 mM -1.9 -0.8 N.D. +0.5 +0.4
vitamin With vitamins t1 +0.6 -0.5 N.D. -1.6 -0.2
stress Furfuryl Alcohol 0.3 vol% -2.7 +0.1 N.D. +0.5 +0.4
stress Nickel (II) chloride 0.8 mM -2.1 -0.6 N.D. +1.3 -0.0
RCH2 grown on a colony of ecoli +0.8 -0.2 N.D. -1.8 +0.1
stress D-Cycloserine 0.032 mg/ml +1.1 +0.4 N.D. -2.2 -0.2
radiation Ionizing radiation, 319.06 Gy, +1.3 +0.0 N.D. -1.3 -0.5
RCH2 grown on a colony of Serratia -1.0 +0.9 N.D. -0.6 +0.6
RCH2 grown on a colony of N2F3 +1.2 -0.5 N.D. +1.0 -0.4
radiation Ionizing radiation, 319.06 Gy, +2.0 -0.0 N.D. +0.6 -0.5
carbon source L-tyrosine (C) +1.7 +0.8 N.D. +0.4 -0.1
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