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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1463 and Psest_1464 overlap by 4 nucleotides
Psest_1464 and Psest_1465 are separated by 75 nucleotides
Psest_1465 and Psest_1466 are separated by 43 nucleotides
Psest_1466 and Psest_1467 are separated by 130 nucleotides
Psest_1463: Psest_1463 - SufE protein probably involved in Fe-S center assembly, at 1,571,176 to 1,571,598
_1463
Psest_1464: Psest_1464 - Selenocysteine lyase, at 1,571,595 to 1,572,800
_1464
Psest_1465: Psest_1465 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 1,572,876 to 1,573,910
_1465
Psest_1466: Psest_1466 - transcriptional regulator, Spx/MgsR family, at 1,573,954 to 1,574,325
_1466
Psest_1467: Psest_1467 - Thioredoxin., at 1,574,456 to 1,574,881
_1467
Group
Condition
Psest
_1463
Psest
_1464
Psest
_1465
Psest
_1466
Psest
_1467
stress
2-Furfuraldehyde 0.05 vol%
-5.4
-0.3
N.D.
+0.6
-0.3
nitrogen source
L-Alanine (N)
-2.4
-2.2
N.D.
-0.0
-0.1
nitrogen source
L-Valine (N)
-2.0
-1.0
N.D.
-1.3
-0.5
nitrogen source
L-Alanine (N)
-1.7
-2.1
N.D.
-0.5
-0.2
carbon source
propionate (C)
-3.6
-0.1
N.D.
-0.4
-0.2
nitrogen source
L-Valine (N)
-2.0
-1.3
N.D.
-0.5
-0.4
stress
D-Cycloserine 0.032 mg/ml
-1.9
+0.2
N.D.
-2.2
-0.2
RCH2 grown on a colony of N2A2
-2.7
+0.3
N.D.
-1.3
+0.1
nutrient
L-tyrosine
-2.9
-0.3
N.D.
-0.2
-0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-1.2
-0.2
N.D.
-1.9
-0.2
stress
Def Carbenicillin 0.02 mg/ml
-2.1
-0.6
N.D.
-0.3
-0.4
carbon source
L-Alanine (C)
-1.8
-0.7
N.D.
-0.4
+0.0
nutrient
L-tyrosine
-2.8
-0.2
N.D.
-0.1
+0.2
stress
Paraquat dichloride 0.015 mg/ml
-2.0
+0.4
N.D.
-0.9
-0.3
stress
nitrite 2.5 mM
-1.5
+0.1
N.D.
-1.4
-0.1
stress
Nickel (II) chloride 0.9 mM
-3.0
-0.6
N.D.
+0.8
-0.0
stress
A22 0.002 mg/ml
-1.7
+0.2
N.D.
-0.9
-0.3
stress
Nickel (II) chloride 1 mM
-2.1
-0.8
N.D.
+0.5
-0.0
stress
Nalidixic 0.00390625 mg/ml
-0.4
+0.4
N.D.
-1.7
-0.5
stress
Choline Lysine 20 mM
-1.9
-0.8
N.D.
+0.5
+0.4
vitamin
With vitamins t1
+0.6
-0.5
N.D.
-1.6
-0.2
stress
Furfuryl Alcohol 0.3 vol%
-2.7
+0.1
N.D.
+0.5
+0.4
stress
Nickel (II) chloride 0.8 mM
-2.1
-0.6
N.D.
+1.3
-0.0
RCH2 grown on a colony of ecoli
+0.8
-0.2
N.D.
-1.8
+0.1
stress
D-Cycloserine 0.032 mg/ml
+1.1
+0.4
N.D.
-2.2
-0.2
radiation
Ionizing radiation, 319.06 Gy,
+1.3
+0.0
N.D.
-1.3
-0.5
RCH2 grown on a colony of Serratia
-1.0
+0.9
N.D.
-0.6
+0.6
RCH2 grown on a colony of N2F3
+1.2
-0.5
N.D.
+1.0
-0.4
radiation
Ionizing radiation, 319.06 Gy,
+2.0
-0.0
N.D.
+0.6
-0.5
carbon source
L-tyrosine (C)
+1.7
+0.8
N.D.
+0.4
-0.1
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