Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1450 and Psest_1451 are separated by 157 nucleotidesPsest_1451 and Psest_1452 are separated by 160 nucleotidesPsest_1452 and Psest_1453 are separated by 48 nucleotidesPsest_1453 and Psest_1454 are separated by 72 nucleotides Psest_1450: Psest_1450 - Transcriptional regulator, at 1,558,367 to 1,559,293 _1450 Psest_1451: Psest_1451 - Uncharacterized ABC-type transport system, permease components, at 1,559,451 to 1,560,041 _1451 Psest_1452: Psest_1452 - 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase, at 1,560,202 to 1,562,511 _1452 Psest_1453: Psest_1453 - Glycerol-3-phosphate dehydrogenase, at 1,562,560 to 1,564,104 _1453 Psest_1454: Psest_1454 - ybaK/ebsC protein, at 1,564,177 to 1,564,647 _1454
Group Condition Psest_1450 Psest_1451 Psest_1452 Psest_1453 Psest_1454
stress Def Benzethonium chloride 0.008 mM N.D. -0.2 -5.0 -0.3 +0.2
carbon source RCH2 defined media N.D. -0.5 -4.5 -0.2 +0.0
stress Def methylglyoxal 0.01 vol% N.D. +0.0 -5.2 -0.0 +0.0
nitrogen source L-Glutamic (N) N.D. -1.0 -3.8 -0.3 -0.1
nitrogen source nitrite (N) N.D. -1.3 -3.2 -0.3 -0.4
temperature Glucose defined media 37C sample1 N.D. -0.8 -3.9 -0.1 +0.1
stress Def Tetracycline 0.0004 mg/ml N.D. -0.4 -3.8 -0.2 -0.2
carbon source RCH2 defined media N.D. -0.6 -4.0 -0.1 +0.2
stress Def Fusidic 0.064 mg/ml N.D. +0.1 -4.1 -0.2 -0.3
stress Def Polymyxin B sulfate 0.00008 mg/ml N.D. -0.8 -3.8 -0.0 +0.2
carbon source L-Lactate (C) N.D. +0.0 -4.1 -0.2 -0.2
stress Def Nalidixic 0.0005 mg/ml N.D. -0.3 -4.2 +0.1 +0.1
temperature Glucose defined 30C timecourse1 timepoint 3 N.D. +0.0 -4.1 -0.4 +0.1
carbon source Glucose defined media N.D. -0.2 -3.9 -0.3 +0.1
nitrogen source L-Proline (N) N.D. +0.4 -4.6 +0.2 -0.1
stress Def Thallium(I) acetate 0.125 mg/ml N.D. -0.6 -3.3 -0.5 +0.2
carbon source RCH2 defined media N.D. -0.5 -3.8 -0.0 +0.2
stress Def Doxycycline hyclate 0.0002 mg/ml N.D. +0.2 -4.1 +0.0 -0.2
stress Def Polymyxin B sulfate 0.0001 mg/ml N.D. -0.1 -3.9 -0.2 +0.2
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. -0.5 -3.5 -0.3 +0.3
stress Def Neomycin 0.0008 mg/ml N.D. -0.4 -3.4 -0.3 +0.3
nitrogen source L-Glutamine (N) N.D. +0.3 -4.4 +0.1 +0.3
nitrogen source L-Alanine (N) N.D. +0.2 -4.2 +0.4 +0.0
stress Def Vancomycin 0.008 mg/ml N.D. +0.5 -3.9 -0.0 -0.1
stress Def Neomycin 0.0002 mg/ml N.D. +0.2 -3.9 +0.3 +0.1
nitrogen source nitrate (N) N.D. +0.4 -3.9 +0.3 +0.1
nitrogen source D-Alanine (N) N.D. +0.6 -4.2 +0.2 +0.2
carbon source butyrate (C) N.D. +0.1 -3.1 -0.6 +0.7
vitamin No vitamins t1 N.D. +0.9 -3.4 +0.2 -0.0
vitamin No vitamins t2 N.D. +0.9 -3.5 +0.3 +0.0
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