Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1389 and Psest_1390 are separated by 17 nucleotidesPsest_1390 and Psest_1391 are separated by 65 nucleotidesPsest_1391 and Psest_1392 are separated by 12 nucleotidesPsest_1392 and Psest_1393 are separated by 250 nucleotides Psest_1389: Psest_1389 - hypothetical protein, at 1,497,898 to 1,498,506 _1389 Psest_1390: Psest_1390 - Uncharacterized ABC-type transport system, permease component, at 1,498,524 to 1,499,450 _1390 Psest_1391: Psest_1391 - ABC-type uncharacterized transport system, permease component, at 1,499,516 to 1,500,622 _1391 Psest_1392: Psest_1392 - ABC-type uncharacterized transport systems, ATPase components, at 1,500,635 to 1,502,191 _1392 Psest_1393: Psest_1393 - AraC-type DNA-binding domain-containing proteins, at 1,502,442 to 1,503,362 _1393
Group Condition Psest_1389 Psest_1390 Psest_1391 Psest_1392 Psest_1393
RCH2 grown on a colony of N2C3 +0.3 -1.2 -1.4 -2.0 -0.4
RCH2 grown on a colony of N2F3 +0.6 -0.6 -1.2 -2.2 -0.5
stress Polymyxin B sulfate 0.0001 mg/ml -0.3 -1.0 -1.2 -0.3 -0.2
RCH2 grown on a colony of N2F3 -0.3 -1.0 -0.7 -0.6 -0.1
nitrogen source L-Isoleucine (N) -0.8 -0.3 -0.6 -0.0 -0.6
vitamin With vitamins t1 -0.7 -0.6 -0.4 -0.5 +0.2
stress syringaldehyde 3 mM -0.5 -0.1 -0.6 -0.9 +0.7
nitrogen source Cytosine (N) +0.4 -0.7 -0.6 -0.2 -0.1
stress Spectinomycin 0.00625 mg/ml +0.3 -0.9 +0.3 -0.5 -0.0
carbon source propionate (C) -0.5 +0.2 +0.6 -1.5 +0.7
nitrogen source nitrite (N) +0.9 -0.9 -0.1 +0.0 -0.4
temperature LB 26C sample1 +0.3 +0.8 -0.2 -1.1 -0.1
temperature LB 30C timecourse2 timepoint 1 +0.2 +0.5 -0.6 -0.8 +0.4
stress Def Chlorate 20 mM +0.0 +0.9 -0.4 -0.6 +0.1
RCH2 grown on a colony of Serratia -0.6 +1.0 -0.8 +0.3 +0.2
stress syringaldehyde 4 mM -0.2 -0.5 +0.4 -0.4 +0.9
stress Def 2-Furfuraldehyde 0.032 vol% +0.8 -0.5 -0.1 -1.0 +1.2
stress nitrate 250 mM +0.9 -0.4 -0.0 -0.4 +0.3
stress Cephalothin 0.04 mg/ml +0.9 -0.5 -0.2 +0.3 +0.3
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.2 +1.2 +0.2 -0.3 -0.0
stress D-Cycloserine 0.032 mg/ml -0.4 +0.8 +0.6 +0.2 +0.2
stress syringaldehyde 4 mM +0.4 +0.5 +0.0 -0.1 +1.0
temperature LB 30C timecourse1 timepoint 2 +0.7 +0.4 +0.7 -0.2 +0.2
stress Furfuryl Alcohol 0.05 vol% -0.1 +0.1 +0.5 +1.0 +0.3
stress Lactate-nitrate; anaerobic; cobalt stress sample2 +0.2 +0.9 +0.2 +0.6 +0.0
stress perchlorate 25 mM +0.3 +0.6 +0.5 +0.1 +0.4
stress Vanillin 2 mM +0.9 +1.0 +0.4 +0.1 +0.9
stress Def Carbenicillin 0.008 mg/ml +1.5 +0.2 +0.5 +1.0 +0.2
stress Def Carbenicillin 0.02 mg/ml +0.5 +0.9 +0.8 +0.8 +0.8
stress Chlorate 75 mM +1.5 +0.7 +0.8 +0.4 +0.4
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