Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1342 and Psest_1343 are separated by 16 nucleotidesPsest_1343 and Psest_1344 are separated by 230 nucleotidesPsest_1344 and Psest_1345 are separated by 11 nucleotidesPsest_1345 and Psest_1346 are separated by 246 nucleotides Psest_1342: Psest_1342 - Protein kinase domain., at 1,452,573 to 1,454,126 _1342 Psest_1343: Psest_1343 - Serine/threonine protein phosphatase, at 1,454,143 to 1,454,919 _1343 Psest_1344: Psest_1344 - rRNA methylases, at 1,455,150 to 1,455,881 _1344 Psest_1345: Psest_1345 - Uncharacterized FAD-dependent dehydrogenases, at 1,455,893 to 1,457,530 _1345 Psest_1346: Psest_1346 - 23S rRNA methylase, at 1,457,777 to 1,458,397 _1346
Group Condition Psest_1342 Psest_1343 Psest_1344 Psest_1345 Psest_1346
stress Def Benzalkonium Chloride 0.002 mg/ml +0.1 N.D. -1.2 -0.5 N.D.
stress nitrate 250 mM +0.2 N.D. -0.8 -0.5 N.D.
stress Choline Lysine 20 mM +0.2 N.D. -1.1 -0.3 N.D.
stress Choline Lysine 20 mM -0.1 N.D. -0.9 -0.2 N.D.
stress Def Chlorate 20 mM -0.1 N.D. -0.8 -0.3 N.D.
stress Def Chlorate 40 mM +0.0 N.D. -0.6 -0.5 N.D.
stress Polymyxin B sulfate 0.0001 mg/ml -0.0 N.D. -0.7 -0.3 N.D.
stress Choline chloride 90 mM +0.2 N.D. -0.7 -0.5 N.D.
stress Cephalothin 0.04 mg/ml +0.0 N.D. -0.6 -0.4 N.D.
stress Def Cephalothin 0.08 mg/ml -0.1 N.D. -0.4 -0.3 N.D.
anaerobic nitrate reduction - anaerobic -0.1 N.D. -0.5 -0.2 N.D.
stress Choline chloride 90 mM +0.3 N.D. -0.9 -0.2 N.D.
stress Def Benzethonium chloride 0.008 mM +0.2 N.D. -0.6 -0.3 N.D.
stress Def 2-Furfuraldehyde 0.032 vol% +0.2 N.D. -0.5 -0.4 N.D.
stress Lactate-nitrate; anaerobic; nickel stress sample1 +0.2 N.D. -0.4 -0.2 N.D.
stress Furfuryl Alcohol 0.05 vol% -0.6 N.D. +0.2 -0.0 N.D.
stress Lactate-nitrate; anaerobic; nickel stress sample2 +0.3 N.D. -0.5 -0.1 N.D.
vitamin No vitamins t2 -0.3 N.D. -0.2 +0.4 N.D.
carbon source RCH2 defined media +0.4 N.D. -0.3 -0.1 N.D.
RCH2 grown on a colony of 8R2A +0.3 N.D. -0.4 +0.1 N.D.
stress Nickel (II) chloride 1 mM +0.3 N.D. -0.5 +0.2 N.D.
RCH2 grown on a colony of N2A2 +0.5 N.D. +0.0 -0.4 N.D.
RCH2 grown on a colony of Serratia +0.3 N.D. -0.3 +0.2 N.D.
nutrient Min media with glucose +0.4 N.D. -0.2 +0.2 N.D.
vitamin With vitamins t2 +0.4 N.D. -0.1 +0.3 N.D.
stress perchlorate 25 mM +0.4 N.D. +0.2 +0.1 N.D.
stress Paraquat dichloride 0.015 mg/ml +0.1 N.D. +0.5 +0.2 N.D.
stress Def Carbenicillin 0.02 mg/ml +0.5 N.D. +0.2 +0.3 N.D.
stress D-Cycloserine 0.032 mg/ml -0.3 N.D. +1.0 +0.5 N.D.
stress D-Cycloserine 0.032 mg/ml +0.0 N.D. +1.1 +0.6 N.D.
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