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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1341 and Psest_1342 are separated by 60 nucleotides
Psest_1342 and Psest_1343 are separated by 16 nucleotides
Psest_1343 and Psest_1344 are separated by 230 nucleotides
Psest_1344 and Psest_1345 are separated by 11 nucleotides
Psest_1341: Psest_1341 - FOG: FHA domain, at 1,451,658 to 1,452,512
_1341
Psest_1342: Psest_1342 - Protein kinase domain., at 1,452,573 to 1,454,126
_1342
Psest_1343: Psest_1343 - Serine/threonine protein phosphatase, at 1,454,143 to 1,454,919
_1343
Psest_1344: Psest_1344 - rRNA methylases, at 1,455,150 to 1,455,881
_1344
Psest_1345: Psest_1345 - Uncharacterized FAD-dependent dehydrogenases, at 1,455,893 to 1,457,530
_1345
Group
Condition
Psest
_1341
Psest
_1342
Psest
_1343
Psest
_1344
Psest
_1345
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.0
+0.1
N.D.
-1.2
-0.5
stress
nitrate 250 mM
-0.4
+0.2
N.D.
-0.8
-0.5
stress
Def Cephalothin 0.08 mg/ml
-0.6
-0.1
N.D.
-0.4
-0.3
nitrogen source
L-Isoleucine (N)
-0.9
-0.2
N.D.
-0.1
-0.1
stress
Def Phosphomycin 0.125 mg/ml
-0.5
-0.2
N.D.
-0.4
-0.2
anaerobic
nitrate reduction - anaerobic
-0.4
-0.1
N.D.
-0.5
-0.2
stress
Cephalothin 0.04 mg/ml
-0.2
+0.0
N.D.
-0.6
-0.4
stress
Def Chlorate 40 mM
-0.1
+0.0
N.D.
-0.6
-0.5
stress
Choline Lysine 20 mM
+0.1
+0.2
N.D.
-1.1
-0.3
stress
Choline Lysine 20 mM
+0.0
-0.1
N.D.
-0.9
-0.2
stress
Benzethonium chloride 0.01 mM
-0.5
-0.2
N.D.
-0.3
-0.0
stress
Def Chlorate 20 mM
+0.1
-0.1
N.D.
-0.8
-0.3
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.0
-0.0
N.D.
-0.7
-0.3
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.3
+0.2
N.D.
-0.5
-0.4
stress
Def Benzethonium chloride 0.008 mM
-0.2
+0.2
N.D.
-0.6
-0.3
stress
Lactate-nitrate; anaerobic; nickel stress sample1
-0.4
+0.2
N.D.
-0.4
-0.2
stress
Choline chloride 90 mM
+0.4
+0.2
N.D.
-0.7
-0.5
stress
Choline chloride 90 mM
+0.2
+0.3
N.D.
-0.9
-0.2
lb
LB
-0.5
-0.3
N.D.
-0.1
+0.3
stress
Lactate-nitrate; anaerobic sample3
-0.4
+0.4
N.D.
-0.2
+0.1
carbon source
propionate (C)
-0.4
+0.4
N.D.
-0.2
+0.1
stress
Def Carbenicillin 0.008 mg/ml
+0.3
+0.4
N.D.
-0.2
-0.1
RCH2 grown on a colony of Serratia
+0.2
+0.3
N.D.
-0.3
+0.2
stress
D-Cycloserine 0.032 mg/ml
-0.3
-0.3
N.D.
+1.0
+0.5
carbon source
propionate (C)
+0.5
-0.1
N.D.
+0.1
+0.4
stress
Thallium(I) acetate 0.08 mg/ml
+0.5
+0.2
N.D.
+0.4
+0.1
stress
Paraquat dichloride 0.015 mg/ml
+0.3
+0.1
N.D.
+0.5
+0.2
stress
perchlorate 25 mM
+0.7
+0.4
N.D.
+0.2
+0.1
stress
D-Cycloserine 0.032 mg/ml
-0.2
+0.0
N.D.
+1.1
+0.6
stress
Def Carbenicillin 0.02 mg/ml
+0.8
+0.5
N.D.
+0.2
+0.3
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