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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_1328 and Psest_1329 are separated by 1 nucleotides
Psest_1329 and Psest_1330 overlap by 4 nucleotides
Psest_1330 and Psest_1331 are separated by 241 nucleotides
Psest_1331 and Psest_1332 are separated by 69 nucleotides
Psest_1328: Psest_1328 - hypothetical protein, at 1,431,700 to 1,431,996
_1328
Psest_1329: Psest_1329 - Alkylated DNA repair protein, at 1,431,998 to 1,432,615
_1329
Psest_1330: Psest_1330 - hypothetical protein, at 1,432,612 to 1,432,773
_1330
Psest_1331: Psest_1331 - hypothetical protein, at 1,433,015 to 1,433,125
_1331
Psest_1332: Psest_1332 - alpha-1,6-glucosidases, pullulanase-type, at 1,433,195 to 1,436,314
_1332
Group
Condition
Psest
_1328
Psest
_1329
Psest
_1330
Psest
_1331
Psest
_1332
vitamin
With vitamins t2
N.D.
-0.9
N.D.
N.D.
-0.2
nutrient
Min media with glucose
N.D.
-0.6
N.D.
N.D.
-0.1
stress
Benzalkonium Chloride 0.002 mg/ml
N.D.
-0.4
N.D.
N.D.
-0.3
stress
Vanillin 2 mM
N.D.
-0.6
N.D.
N.D.
-0.1
stress
Thallium(I) acetate 0.08 mg/ml
N.D.
-0.6
N.D.
N.D.
-0.1
stress
Def Neomycin 0.0008 mg/ml
N.D.
-0.7
N.D.
N.D.
-0.0
RCH2 grown on a colony of Serratia
N.D.
-0.9
N.D.
N.D.
+0.2
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample1
N.D.
-0.6
N.D.
N.D.
-0.1
stress
Lactate-nitrate; anaerobic; cobalt stress sample2
N.D.
-0.3
N.D.
N.D.
-0.3
anaerobic
Nitrate/ lactate media with Nitrate 250mM
N.D.
-0.5
N.D.
N.D.
-0.1
stress
Def Chloride 400 mM
N.D.
-0.3
N.D.
N.D.
-0.3
stress
Paraquat dichloride 0.015 mg/ml
N.D.
-0.5
N.D.
N.D.
+0.1
nutrient
L-tyrosine
N.D.
-0.5
N.D.
N.D.
+0.1
stress
Paraquat dichloride 0.015 mg/ml
N.D.
-0.5
N.D.
N.D.
+0.1
stress
Lactate-nitrate; anaerobic; cadmium stress sample1
N.D.
-0.5
N.D.
N.D.
+0.1
stress
Dimethyl Sulfoxide 5 vol%
N.D.
-0.5
N.D.
N.D.
+0.2
stress
Fusidic 0.016 mg/ml
N.D.
-0.4
N.D.
N.D.
+0.2
lb
LB
N.D.
-0.4
N.D.
N.D.
+0.3
stress
Thallium(I) acetate 0.09 mg/ml
N.D.
+0.3
N.D.
N.D.
-0.3
stress
Thallium(I) acetate 0.08 mg/ml
N.D.
+0.6
N.D.
N.D.
-0.1
nitrogen source
L-Isoleucine (N)
N.D.
+0.3
N.D.
N.D.
+0.3
stress
Nickel (II) chloride 0.9 mM
N.D.
+0.4
N.D.
N.D.
+0.2
stress
Def 2-Furfuraldehyde 0.032 vol%
N.D.
+0.3
N.D.
N.D.
+0.3
nitrogen source
L-Valine (N)
N.D.
+0.4
N.D.
N.D.
+0.3
stress
Thallium(I) acetate 0.1 mg/ml
N.D.
+0.4
N.D.
N.D.
+0.2
stress
Benzethonium chloride 0.0125 mM
N.D.
+0.7
N.D.
N.D.
-0.1
stress
Cephalothin 0.04 mg/ml
N.D.
+0.4
N.D.
N.D.
+0.4
stress
Nalidixic 0.00390625 mg/ml
N.D.
+0.6
N.D.
N.D.
+0.3
stress
Cisplatin 0.003 mg/ml
N.D.
+0.7
N.D.
N.D.
+0.2
nitrogen source
nitrite (N)
N.D.
+0.6
N.D.
N.D.
+0.4
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