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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1315 and Psest_1316 overlap by 4 nucleotides
Psest_1316 and Psest_1317 are separated by 84 nucleotides
Psest_1317 and Psest_1318 overlap by 4 nucleotides
Psest_1318 and Psest_1319 overlap by 7 nucleotides
Psest_1315: Psest_1315 - hypothetical protein, at 1,416,326 to 1,416,628
_1315
Psest_1316: Psest_1316 - Predicted transmembrane sensor domain, at 1,416,625 to 1,417,983
_1316
Psest_1317: Psest_1317 - phosphonate ABC transporter, permease protein PhnE, at 1,418,068 to 1,418,835
_1317
Psest_1318: Psest_1318 - ABC-type phosphate/phosphonate transport system, permease component, at 1,418,832 to 1,419,665
_1318
Psest_1319: Psest_1319 - ABC-type phosphate/phosphonate transport system, ATPase component, at 1,419,659 to 1,420,489
_1319
Group
Condition
Psest
_1315
Psest
_1316
Psest
_1317
Psest
_1318
Psest
_1319
stress
Nalidixic 0.00390625 mg/ml
-5.6
+0.2
-0.0
-1.0
-0.3
stress
Def Carbenicillin 0.008 mg/ml
-1.4
-0.2
-3.1
-0.7
-0.7
stress
Def Carbenicillin 0.02 mg/ml
-0.2
-0.1
-1.8
-1.2
-0.8
stress
nitrate 250 mM
-0.3
-0.4
-1.2
-1.3
-0.0
stress
Lactate-nitrate; anaerobic; copper stress sample1
-1.7
-0.1
-0.6
-0.6
-0.3
nitrogen source
nitrate (N)
-1.3
-0.4
-0.5
-0.5
-0.2
stress
Gentamicin 0.0016 mg/ml
-0.2
+0.4
-1.3
-1.0
-0.7
stress
Furfuryl Alcohol 0.05 vol%
-1.4
-0.4
-0.2
-0.6
-0.2
carbon source
butyrate (C)
-0.8
-0.3
-0.3
-0.5
-0.8
stress
D-Cycloserine 0.032 mg/ml
-0.2
+0.1
-1.1
-0.6
-0.9
nitrogen source
nitrite (N)
-0.9
-0.1
+0.1
-0.7
-0.7
stress
2-Furfuraldehyde 0.05 vol%
-1.9
-0.0
+0.2
-0.3
-0.1
nutrient
L-tyrosine
-1.7
+0.1
+0.1
-0.3
-0.3
stress
Cobalt chloride 0.07 mM
-1.2
-0.1
-0.1
+0.2
-0.8
RCH2 grown on a colony of N2F3
-0.6
+0.1
-1.2
+0.2
-0.4
stress
Chlorate 75 mM
-1.5
+0.3
+0.2
+0.2
-0.9
RCH2 grown on a colony of 8R2A
-2.1
-0.0
-0.6
+0.9
+0.2
stress
Chloride 200 mM
-0.3
-0.2
-0.7
-0.6
+0.4
RCH2 grown on a colony of Serratia
-1.2
+0.3
-0.3
+0.6
-0.3
stress
Def Vancomycin 0.016 mg/ml
+0.6
-0.2
-0.8
+0.2
-0.5
stress
Benzethonium chloride 0.0125 mM
+1.0
-0.2
-0.2
-1.2
+0.3
RCH2 grown on a colony of N2A2
-1.6
+0.2
+0.4
+0.8
+0.1
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.8
+0.4
+0.4
-1.6
-0.1
vitamin
With vitamins t1
+1.3
-0.2
-0.1
-0.3
-0.4
carbon source
L-tyrosine (C)
+1.7
-0.0
-0.3
-0.3
-0.2
carbon source
propionate (C)
+1.2
+0.0
+0.3
+0.5
-0.4
carbon source
L-Glutamine (C)
+1.0
+0.7
+0.3
-0.3
+0.1
stress
Def 2-Furfuraldehyde 0.032 vol%
+1.0
+0.1
+1.0
+0.4
-0.6
stress
Bacitracin 0.25 mg/ml
+1.9
+1.0
-0.3
-0.4
+0.4
stress
Bacitracin 0.25 mg/ml
+2.2
+1.0
-0.2
+0.5
+0.1
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