Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_1307 and Psest_1308 are separated by 164 nucleotidesPsest_1308 and Psest_1309 are separated by 2 nucleotidesPsest_1309 and Psest_1310 overlap by 4 nucleotidesPsest_1310 and Psest_1311 overlap by 4 nucleotides Psest_1307: Psest_1307 - Dienelactone hydrolase and related enzymes, at 1,408,189 to 1,408,995 _1307 Psest_1308: Psest_1308 - ABC-type branched-chain amino acid transport systems, ATPase component, at 1,409,160 to 1,409,861 _1308 Psest_1309: Psest_1309 - ABC-type branched-chain amino acid transport systems, ATPase component, at 1,409,864 to 1,410,631 _1309 Psest_1310: Psest_1310 - ABC-type branched-chain amino acid transport system, permease component, at 1,410,628 to 1,411,884 _1310 Psest_1311: Psest_1311 - Branched-chain amino acid ABC-type transport system, permease components, at 1,411,881 to 1,412,804 _1311
Group Condition Psest_1307 Psest_1308 Psest_1309 Psest_1310 Psest_1311
nitrogen source L-Isoleucine (N) -0.0 -1.3 -1.2 -1.4 -1.4
nitrogen source L-Isoleucine (N) +0.1 -1.3 -1.3 -1.2 -1.1
nitrogen source L-Isoleucine (N) +0.0 -0.8 -0.7 -0.9 -1.0
carbon source L-Proline (C) -0.3 -0.4 -0.6 -0.6 -0.6
stress Furfuryl Alcohol 0.05 vol% -0.5 -0.7 -0.7 -0.1 -0.1
nitrogen source L-Alanine (N) -0.0 -0.7 -0.7 -0.2 -0.5
stress Def Carbenicillin 0.02 mg/ml -0.2 -0.5 -0.3 -0.8 -0.3
nitrogen source L-Glutamine (N) +0.2 -0.6 -0.5 -0.6 -0.4
nitrogen source D-Alanine (N) +0.1 -0.5 -0.5 -0.6 -0.4
nitrogen source L-Glutamine (N) +0.2 -0.5 -0.4 -0.6 -0.7
nitrogen source L-Alanine (N) +0.2 -0.6 -0.4 -0.4 -0.4
carbon source L-Proline (C) +0.1 -0.7 -0.3 -0.5 -0.3
nitrogen source D-Alanine (N) +0.3 -0.4 -0.4 -0.6 -0.3
stress Nalidixic 0.00390625 mg/ml -1.1 -0.0 -0.7 +0.6 +0.0
stress Chlorate 75 mM +0.2 -0.8 +0.4 -0.1 -0.5
vitamin No vitamins t1 -0.3 -0.3 -0.4 +0.6 -0.4
stress Doxycycline hyclate 0.0002 mg/ml +0.3 +0.3 -0.3 -1.0 -0.1
nitrogen source L-Isoleucine (N) +0.9 +0.3 -0.7 -0.4 -0.6
carbon source propionate (C) -1.0 -0.1 +0.2 +0.6 +0.4
stress Neomycin 0.004 mg/ml +0.7 +0.5 -0.6 -0.1 -0.2
stress Def Carbenicillin 0.008 mg/ml -0.3 +1.0 +0.4 -0.3 -0.5
RCH2 grown on a colony of Serratia +0.4 +1.0 -0.6 -0.2 -0.2
RCH2 grown on a colony of N2C3 +0.4 -1.2 +1.1 +0.4 +0.1
stress Def Benzalkonium Chloride 0.002 mg/ml +0.1 +1.1 +0.5 -0.1 -0.2
carbon source propionate (C) -0.3 +0.9 +0.4 +0.1 +0.5
anaerobic nitrate reduction - anaerobic +0.2 +1.1 +0.6 -0.0 -0.1
stress Def Benzethonium chloride 0.008 mM +0.2 +1.2 +0.5 +0.0 -0.1
stress sodium fluoride 6.25 mM +0.5 +0.5 +0.2 +0.3 +0.4
stress Fusidic 0.016 mg/ml +0.6 +1.1 +0.5 +0.1 +0.0
stress Cephalothin 0.04 mg/ml +0.5 +1.6 +0.8 -0.1 +0.1
remove
Psest_1307
plot
remove
Psest_1308
plot
remove
Psest_1309
remove
Psest_1310
plot
remove
Psest_1311
plot