Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1268 and Psest_1269 overlap by 13 nucleotidesPsest_1269 and Psest_1270 are separated by 11 nucleotidesPsest_1270 and Psest_1271 are separated by 55 nucleotidesPsest_1271 and Psest_1272 overlap by 15 nucleotides Psest_1268: Psest_1268 - Aspartate/tyrosine/aromatic aminotransferase, at 1,373,633 to 1,374,781 _1268 Psest_1269: Psest_1269 - Predicted amidohydrolase, at 1,374,769 to 1,375,563 _1269 Psest_1270: Psest_1270 - hypothetical protein, at 1,375,575 to 1,375,766 _1270 Psest_1271: Psest_1271 - Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family, at 1,375,822 to 1,376,355 _1271 Psest_1272: Psest_1272 - Protein of Unknown function (DUF2784)., at 1,376,341 to 1,376,712 _1272
Group Condition Psest_1268 Psest_1269 Psest_1270 Psest_1271 Psest_1272
stress Def Carbenicillin 0.008 mg/ml -0.9 +0.0 -0.7 -1.1 -0.4
stress Chlorate 75 mM -0.5 -0.8 +0.6 -1.4 -0.4
temperature LB 30C timecourse2 timepoint 1 -0.2 -0.4 -1.0 -0.6 -0.2
nitrogen source nitrite (N) -0.5 -0.4 -0.8 -0.2 -0.1
stress Def Polymyxin B sulfate 0.00008 mg/ml -0.8 -0.1 -0.6 -0.5 -0.0
RCH2 grown on a colony of N2F3 -0.2 +0.1 +0.5 -1.8 -0.0
stress L-Lysine 200 mM -0.0 +0.3 -0.4 -1.4 -0.0
stress Def Carbenicillin 0.02 mg/ml -0.3 -0.9 +0.1 +0.3 -0.4
stress Furfuryl Alcohol 0.05 vol% -0.4 -0.9 +0.4 +0.0 -0.4
carbon source RCH2 defined media -0.8 +0.2 -0.3 -0.5 +0.2
stress 2-Furfuraldehyde 0.05 vol% +0.3 -0.5 -0.7 +0.1 -0.2
stress Lactate-nitrate; anaerobic; nickel stress sample3 -0.4 -0.3 -0.7 +0.5 -0.1
stress nitrate 250 mM -0.9 +0.5 -0.1 -0.8 +0.3
stress Def 2-Furfuraldehyde 0.032 vol% -0.9 -0.6 -0.1 +0.2 +0.4
stress Lomefloxacin 0.0001 mM -0.2 -0.1 +0.5 -0.7 -0.2
stress Cephalothin 0.04 mg/ml -0.5 +0.5 -0.1 -0.7 +0.0
carbon source Glycolic Acid (C) -0.2 -0.3 -0.9 +0.4 +0.2
nitrogen source L-Glutamic (N) -0.5 -0.1 +1.0 -1.3 +0.1
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.2 -0.5 -0.7 +0.7 +0.0
stress nitrate 200 mM -0.1 +0.2 -1.0 +0.1 +0.3
RCH2 grown on a colony of N2F3 -0.4 -0.2 +0.9 -0.4 -0.2
stress Lactate-nitrate; anaerobic; copper stress sample3 -0.2 +0.1 +0.5 -0.8 +0.3
stress Carbenicillin 0.008 mg/ml +0.5 -0.4 -0.6 +0.6 -0.2
stress Paraquat dichloride 0.015 mg/ml -0.4 -0.5 +1.2 -0.2 +0.1
RCH2 grown on a colony of N2C3 -0.1 +0.0 +1.0 -0.6 -0.1
stress Spectinomycin 0.00625 mg/ml -0.5 +0.4 +0.6 +0.2 -0.3
stress A22 0.005 mg/ml -0.3 +0.2 +0.7 -0.7 +0.4
RCH2 grown on a colony of Serratia +0.5 +0.1 +0.6 -0.5 -0.1
RCH2 grown on a colony of Serratia +0.0 +0.1 +1.8 +0.2 -0.0
nitrogen source L-Isoleucine (N) +0.4 +0.4 +0.2 +0.7 +0.4
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