Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1242 and Psest_1243 are separated by 42 nucleotidesPsest_1243 and Psest_1244 are separated by 64 nucleotidesPsest_1244 and Psest_1245 are separated by 12 nucleotidesPsest_1245 and Psest_1246 are separated by 77 nucleotides Psest_1242: Psest_1242 - tRNA-guanine transglycosylase, queuosine-34-forming, at 1,350,083 to 1,351,216 _1242 Psest_1243: Psest_1243 - preprotein translocase, YajC subunit, at 1,351,259 to 1,351,588 _1243 Psest_1244: Psest_1244 - protein-export membrane protein, SecD/SecF family, at 1,351,653 to 1,353,521 _1244 Psest_1245: Psest_1245 - protein-export membrane protein, SecD/SecF family, at 1,353,534 to 1,354,445 _1245 Psest_1246: Psest_1246 - Predicted outer membrane lipoprotein, at 1,354,523 to 1,355,056 _1246
Group Condition Psest_1242 Psest_1243 Psest_1244 Psest_1245 Psest_1246
stress Furfuryl Alcohol 0.05 vol% -4.0 N.D. N.D. N.D. -0.6
stress methylglyoxal 0.0016 vol% -4.0 N.D. N.D. N.D. -0.5
stress Nickel (II) chloride 0.8 mM -3.3 N.D. N.D. N.D. -0.1
stress Fusidic 0.016 mg/ml -2.9 N.D. N.D. N.D. +0.1
temperature Glucose defined 30C timecourse1 timepoint 2 -2.7 N.D. N.D. N.D. -0.1
stress Choline Lysine 20 mM -2.9 N.D. N.D. N.D. +0.2
nitrogen source Glycine (N) -2.4 N.D. N.D. N.D. -0.2
stress Choline Lysine 20 mM -2.6 N.D. N.D. N.D. +0.0
nitrogen source nitrite (N) -2.3 N.D. N.D. N.D. -0.2
nitrogen source Cytosine (N) -2.5 N.D. N.D. N.D. -0.0
RCH2 grown on a colony of Serratia -2.5 N.D. N.D. N.D. +0.0
carbon source L-Alanine (C) -2.0 N.D. N.D. N.D. -0.4
nitrogen source nitrate (N) -2.3 N.D. N.D. N.D. -0.0
stress Gentamicin 0.0016 mg/ml -2.2 N.D. N.D. N.D. -0.1
stress Def Fusidic 0.064 mg/ml -2.2 N.D. N.D. N.D. -0.1
stress Anaerobic 500 uM Zinc chloride sample2 -2.2 N.D. N.D. N.D. -0.0
stress nitrate 200 mM -2.0 N.D. N.D. N.D. -0.2
stress Paraquat dichloride 0.015 mg/ml -1.4 N.D. N.D. N.D. -0.7
nitrogen source Parabanic Acid (N) -2.0 N.D. N.D. N.D. -0.1
anaerobic Nitrate/ lactate media with Nitrate 250mM -2.1 N.D. N.D. N.D. +0.1
RCH2 grown on a colony of Serratia -1.7 N.D. N.D. N.D. -0.3
metal limitation Lactate; aerobic; with copper, sample3 -2.0 N.D. N.D. N.D. -0.1
stress nitrate 250 mM -2.4 N.D. N.D. N.D. +0.4
nitrogen source nitrite (N) -1.9 N.D. N.D. N.D. -0.1
stress Def methylglyoxal 0.01 vol% -2.0 N.D. N.D. N.D. +0.0
metal limitation Anaerobic, with iron sample2 -1.9 N.D. N.D. N.D. +0.1
stress Spectinomycin 0.00625 mg/ml -2.1 N.D. N.D. N.D. +0.4
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -1.9 N.D. N.D. N.D. +0.3
stress Cisplatin 0.003 mg/ml -1.9 N.D. N.D. N.D. +0.2
stress Def 2-Furfuraldehyde 0.032 vol% -2.0 N.D. N.D. N.D. +0.3
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