Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1241 and Psest_1242 overlap by 4 nucleotidesPsest_1242 and Psest_1243 are separated by 42 nucleotidesPsest_1243 and Psest_1244 are separated by 64 nucleotidesPsest_1244 and Psest_1245 are separated by 12 nucleotides Psest_1241: Psest_1241 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 1,349,037 to 1,350,086 _1241 Psest_1242: Psest_1242 - tRNA-guanine transglycosylase, queuosine-34-forming, at 1,350,083 to 1,351,216 _1242 Psest_1243: Psest_1243 - preprotein translocase, YajC subunit, at 1,351,259 to 1,351,588 _1243 Psest_1244: Psest_1244 - protein-export membrane protein, SecD/SecF family, at 1,351,653 to 1,353,521 _1244 Psest_1245: Psest_1245 - protein-export membrane protein, SecD/SecF family, at 1,353,534 to 1,354,445 _1245
Group Condition Psest_1241 Psest_1242 Psest_1243 Psest_1244 Psest_1245
stress Furfuryl Alcohol 0.05 vol% -3.0 -4.0 N.D. N.D. N.D.
stress Nickel (II) chloride 0.8 mM -2.0 -3.3 N.D. N.D. N.D.
stress Gentamicin 0.0016 mg/ml -3.1 -2.2 N.D. N.D. N.D.
stress methylglyoxal 0.0016 vol% -1.2 -4.0 N.D. N.D. N.D.
stress Fusidic 0.016 mg/ml -2.2 -2.9 N.D. N.D. N.D.
stress Choline Lysine 20 mM -1.6 -2.9 N.D. N.D. N.D.
stress nitrate 250 mM -1.6 -2.4 N.D. N.D. N.D.
nitrogen source Glycine (N) -2.3 -1.5 N.D. N.D. N.D.
nitrogen source Glycine (N) -1.4 -2.4 N.D. N.D. N.D.
nitrogen source nitrate (N) -1.4 -2.3 N.D. N.D. N.D.
temperature Glucose defined 30C timecourse1 timepoint 2 -0.9 -2.7 N.D. N.D. N.D.
nitrogen source Parabanic Acid (N) -1.5 -2.0 N.D. N.D. N.D.
nitrogen source nitrite (N) -1.5 -1.9 N.D. N.D. N.D.
stress Choline Lysine 20 mM -0.7 -2.6 N.D. N.D. N.D.
nitrogen source Cytosine (N) -0.8 -2.5 N.D. N.D. N.D.
stress Def 2-Furfuraldehyde 0.032 vol% -1.3 -2.0 N.D. N.D. N.D.
temperature Glucose defined 30C timecourse1 timepoint 3 -1.6 -1.7 N.D. N.D. N.D.
RCH2 grown on a colony of Serratia -0.6 -2.5 N.D. N.D. N.D.
nitrogen source D-Alanine (N) -1.5 -1.5 N.D. N.D. N.D.
nitrogen source nitrite (N) -0.6 -2.3 N.D. N.D. N.D.
stress Def Carbenicillin 0.008 mg/ml -1.7 -1.3 N.D. N.D. N.D.
nitrogen source nitrite (N) -1.4 -1.5 N.D. N.D. N.D.
carbon source D-Fructose (C) -1.1 -1.7 N.D. N.D. N.D.
stress nitrate 200 mM -0.8 -2.0 N.D. N.D. N.D.
stress Vanillin 2 mM -0.9 -1.9 N.D. N.D. N.D.
carbon source D-Maltose (C) -1.1 -1.6 N.D. N.D. N.D.
carbon source D-Fructose (C) -1.0 -1.6 N.D. N.D. N.D.
radiation Ionizing radiation, 319.06 Gy, -1.1 +1.7 N.D. N.D. N.D.
carbon source propionate (C) +1.1 +1.6 N.D. N.D. N.D.
stress Choline chloride 90 mM +1.5 +1.3 N.D. N.D. N.D.
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