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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1210 and Psest_1211 overlap by 8 nucleotides
Psest_1211 and Psest_1212 are separated by 161 nucleotides
Psest_1212 and Psest_1213 are separated by 137 nucleotides
Psest_1213 and Psest_1214 are separated by 202 nucleotides
Psest_1210: Psest_1210 - xanthine dehydrogenase, molybdopterin binding subunit, at 1,313,419 to 1,315,815
_1210
Psest_1211: Psest_1211 - xanthine dehydrogenase, small subunit, at 1,315,808 to 1,317,256
_1211
Psest_1212: Psest_1212 - Isopenicillin N synthase and related dioxygenases, at 1,317,418 to 1,318,392
_1212
Psest_1213: Psest_1213 - Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein, at 1,318,530 to 1,319,621
_1213
Psest_1214: Psest_1214 - Cytosine deaminase and related metal-dependent hydrolases, at 1,319,824 to 1,321,179
_1214
Group
Condition
Psest
_1210
Psest
_1211
Psest
_1212
Psest
_1213
Psest
_1214
nitrogen source
L-Isoleucine (N)
-0.6
-0.5
-0.1
-1.0
-0.6
nitrogen source
nitrite (N)
-0.3
-0.4
-0.8
-1.0
+0.3
stress
Def Cephalothin 0.08 mg/ml
-0.6
-0.5
-0.2
-0.4
-0.5
RCH2 grown on a colony of N2F3
+0.0
-0.3
-0.3
-1.1
-0.1
stress
Def Phosphomycin 0.125 mg/ml
-0.3
-0.5
-0.2
-0.3
-0.2
lb
LB
-0.0
-0.7
-0.2
-0.1
-0.3
stress
A22 0.005 mg/ml
-0.4
-0.3
-0.3
-0.2
-0.3
RCH2 grown on a colony of N2F3
+0.2
-0.7
+0.1
-1.3
+0.3
stress
Bacitracin 0.25 mg/ml
-0.1
-0.5
-0.1
+0.2
-0.7
RCH2 grown on a colony of N2C3
-0.3
-0.4
+0.0
-0.6
+0.2
nitrogen source
Adenine (N)
-0.4
-0.4
-0.1
-0.0
+0.6
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.2
-0.2
-0.3
-0.2
+0.4
RCH2 grown on a colony of 8R2A
+0.5
-0.2
+0.3
+0.4
-0.4
carbon source
L-tyrosine (C)
-0.1
-0.4
+0.1
+0.1
+0.9
stress
nitrite 2.5 mM
-0.3
+0.2
-0.2
+0.4
+0.5
stress
Def Chloride 400 mM
+0.2
+0.2
+0.5
+0.6
-0.7
stress
nitrate 250 mM
+0.4
+0.2
+0.0
-0.4
+0.7
stress
nitrate 200 mM
+0.4
+0.9
-0.3
+0.2
-0.2
stress
Gentamicin 0.0016 mg/ml
+0.4
+0.0
-0.1
+0.5
+0.6
stress
Def methylglyoxal 0.01 vol%
+0.3
+0.5
+0.1
+0.1
+0.5
stress
Fusidic 0.016 mg/ml
+0.4
+0.5
+0.1
+0.2
+0.4
nitrogen source
L-Glutamine (N)
+0.4
+0.3
+0.3
+0.2
+0.4
stress
Def Carbenicillin 0.02 mg/ml
+0.1
+0.3
+0.3
+0.2
+0.8
stress
Def Polymyxin B sulfate 0.0001 mg/ml
+0.3
+0.5
+0.1
-0.1
+0.9
stress
Def Thallium(I) acetate 0.125 mg/ml
+0.0
+0.3
+0.3
+0.5
+0.5
stress
Chlorate 75 mM
+0.6
+0.6
+0.1
+0.3
+0.3
stress
Def Neomycin 0.0008 mg/ml
+0.4
+0.6
+0.5
+0.3
+0.1
stress
Def Carbenicillin 0.008 mg/ml
+0.2
+0.4
+0.2
+0.3
+0.8
stress
Benzalkonium Chloride 0.002 mg/ml
+0.5
+0.3
+0.3
+0.1
+0.8
stress
Def Polymyxin B sulfate 0.00008 mg/ml
+0.5
+0.4
+0.2
+0.2
+0.6
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