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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_1200 and Psest_1201 are separated by 280 nucleotides
Psest_1201 and Psest_1202 are separated by 200 nucleotides
Psest_1202 and Psest_1203 are separated by 80 nucleotides
Psest_1203 and Psest_1204 are separated by 347 nucleotides
Psest_1200: Psest_1200 - putative urate catabolism protein, at 1,303,240 to 1,304,172
_1200
Psest_1201: Psest_1201 - hydroxyisourate hydrolase, at 1,304,453 to 1,304,806
_1201
Psest_1202: Psest_1202 - Putative threonine efflux protein, at 1,305,007 to 1,305,633
_1202
Psest_1203: Psest_1203 - Permeases, at 1,305,714 to 1,307,060
_1203
Psest_1204: Psest_1204 - Transcriptional regulators, at 1,307,408 to 1,308,163
_1204
Group
Condition
Psest
_1200
Psest
_1201
Psest
_1202
Psest
_1203
Psest
_1204
nitrogen source
Adenine (N)
-3.8
-5.2
-0.1
+0.1
-0.2
nitrogen source
Adenine (N)
-4.3
-5.2
+0.0
+0.3
-0.0
nitrogen source
Adenine (N)
-4.2
-4.4
-0.1
+0.1
-0.1
stress
Choline Lysine 20 mM
-1.2
+0.1
+0.2
-0.1
-2.6
stress
Choline Lysine 20 mM
-0.8
-0.4
-0.1
-0.4
-2.0
anaerobic
Nitrite/ lactate media with Nitrite 20mM
-0.3
-0.5
-0.0
-0.0
-2.5
nitrogen source
L-Citrulline (N)
-0.8
-0.2
+0.1
+0.1
-2.3
stress
Benzethonium chloride 0.01 mM
-0.2
+0.2
+0.1
-0.0
-3.0
stress
D-Cycloserine 0.032 mg/ml
-0.2
-0.0
-0.0
+0.0
-2.7
stress
Def Carbenicillin 0.008 mg/ml
-1.1
+0.3
-0.0
+0.3
-2.4
stress
Cobalt chloride 0.07 mM
-0.2
-1.0
+0.3
-0.2
-1.6
stress
Paraquat dichloride 0.015 mg/ml
-0.1
-0.4
-0.0
+0.1
-2.2
stress
Gentamicin 0.0016 mg/ml
-1.1
-0.1
+0.0
+0.2
-1.8
stress
nitrite 2.5 mM
-0.7
-0.4
+0.1
-0.2
-1.2
carbon source
L-tyrosine (C)
+0.1
-0.4
-0.1
-0.4
-1.6
carbon source
L-tyrosine (C)
+0.3
-0.5
+0.4
+0.1
-2.7
anaerobic
Nitrite/ lactate media with Nitrite 20mM
-0.2
-0.5
-0.2
+0.2
-1.5
stress
Spectinomycin 0.00625 mg/ml
-0.2
+0.4
+0.0
-0.0
-2.4
nitrogen source
nitrite (N)
-0.6
-0.6
+0.2
-0.0
-1.2
RCH2 grown on a colony of ecoli
-1.2
+0.2
-0.1
-0.0
-0.9
nitrogen source
L-Citrulline (N)
+0.2
-0.8
+0.0
+0.1
-1.5
stress
Paraquat dichloride 0.015 mg/ml
-0.9
+0.2
+0.1
+0.2
-1.3
stress
Doxycycline hyclate 0.0002 mg/ml
-0.6
+0.9
-0.4
-0.2
-1.2
stress
Nickel (II) chloride 0.75 mM
-0.2
+0.3
+0.1
+0.2
-1.9
stress
nitrate 200 mM
-0.6
+0.5
+0.0
+0.3
-1.4
RCH2 grown on a colony of N2F3
+0.5
+0.8
-0.2
+0.0
-1.1
stress
Spectinomycin 0.00625 mg/ml
-0.4
-0.3
-0.3
-0.0
+1.6
stress
Def Chlorate 40 mM
-0.0
+0.0
+0.1
-0.1
+2.1
stress
Def Chlorate 20 mM
-0.2
+0.2
+0.0
-0.0
+2.7
stress
nitrate 250 mM
+0.5
+0.9
-0.1
+0.3
+2.0
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