Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1199 and Psest_1200 overlap by 4 nucleotidesPsest_1200 and Psest_1201 are separated by 280 nucleotidesPsest_1201 and Psest_1202 are separated by 200 nucleotidesPsest_1202 and Psest_1203 are separated by 80 nucleotides Psest_1199: Psest_1199 - OHCU decarboxylase, at 1,302,728 to 1,303,243 _1199 Psest_1200: Psest_1200 - putative urate catabolism protein, at 1,303,240 to 1,304,172 _1200 Psest_1201: Psest_1201 - hydroxyisourate hydrolase, at 1,304,453 to 1,304,806 _1201 Psest_1202: Psest_1202 - Putative threonine efflux protein, at 1,305,007 to 1,305,633 _1202 Psest_1203: Psest_1203 - Permeases, at 1,305,714 to 1,307,060 _1203
Group Condition Psest_1199 Psest_1200 Psest_1201 Psest_1202 Psest_1203
nitrogen source Adenine (N) -6.7 -3.8 -5.2 -0.1 +0.1
nitrogen source Adenine (N) -5.5 -4.3 -5.2 +0.0 +0.3
nitrogen source Adenine (N) -5.3 -4.2 -4.4 -0.1 +0.1
RCH2 grown on a colony of ecoli -1.4 -1.2 +0.2 -0.1 -0.0
RCH2 grown on a colony of N2A2 -0.8 -0.8 -0.5 -0.1 -0.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -1.6 -0.3 -0.6 +0.0 +0.2
anaerobic Nitrate/ lactate media with Nitrate 250mM -1.4 -0.7 +0.3 -0.2 -0.2
stress Choline Lysine 20 mM -0.4 -0.8 -0.4 -0.1 -0.4
stress nitrite 2.5 mM -0.7 -0.7 -0.4 +0.1 -0.2
RCH2 grown on a colony of N2A2 -0.6 -0.9 -0.2 -0.3 +0.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -1.4 -0.6 +0.5 -0.2 -0.3
stress Carbenicillin 0.0065 mg/ml -0.4 -0.6 -0.3 -0.3 -0.3
stress nitrite 2.5 mM -0.6 -0.6 -0.3 +0.0 -0.3
stress 2-Furfuraldehyde 0.05 vol% -1.3 -0.4 -0.1 -0.1 +0.1
nitrogen source L-Citrulline (N) -0.5 -0.8 -0.2 +0.1 +0.1
stress Cobalt chloride 0.07 mM -0.3 -0.2 -1.0 +0.3 -0.2
stress Choline Lysine 20 mM +0.2 -1.2 +0.1 +0.2 -0.1
stress Def Carbenicillin 0.008 mg/ml -0.2 -1.1 +0.3 -0.0 +0.3
carbon source propionate (C) -0.9 -0.3 +0.3 +0.3 +0.1
stress Nickel (II) chloride 1 mM +0.8 -0.3 -0.5 -0.1 -0.2
RCH2 grown on a colony of ecoli +0.1 -0.8 +0.6 +0.2 -0.2
stress Def 2-Furfuraldehyde 0.032 vol% -0.3 -0.9 +0.5 +0.5 +0.1
RCH2 grown on a colony of N2F3 -1.2 -0.0 +0.3 +0.4 +0.4
carbon source RCH2 defined media +0.1 -1.0 +0.4 +0.1 +0.4
stress Choline chloride 90 mM -0.7 +0.4 +0.3 -0.3 +0.2
stress L-Lysine 200 mM -0.1 +0.9 -0.7 -0.0 -0.2
stress Doxycycline hyclate 0.0002 mg/ml +0.5 -0.6 +0.9 -0.4 -0.2
RCH2 grown on a colony of N2F3 -0.9 +0.5 +0.8 -0.2 +0.0
stress syringaldehyde 4 mM -0.7 +0.3 +0.5 +0.2 +0.1
stress nitrate 250 mM +0.0 +0.5 +0.9 -0.1 +0.3
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