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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_1199 and Psest_1200 overlap by 4 nucleotides
Psest_1200 and Psest_1201 are separated by 280 nucleotides
Psest_1201 and Psest_1202 are separated by 200 nucleotides
Psest_1202 and Psest_1203 are separated by 80 nucleotides
Psest_1199: Psest_1199 - OHCU decarboxylase, at 1,302,728 to 1,303,243
_1199
Psest_1200: Psest_1200 - putative urate catabolism protein, at 1,303,240 to 1,304,172
_1200
Psest_1201: Psest_1201 - hydroxyisourate hydrolase, at 1,304,453 to 1,304,806
_1201
Psest_1202: Psest_1202 - Putative threonine efflux protein, at 1,305,007 to 1,305,633
_1202
Psest_1203: Psest_1203 - Permeases, at 1,305,714 to 1,307,060
_1203
Group
Condition
Psest
_1199
Psest
_1200
Psest
_1201
Psest
_1202
Psest
_1203
nitrogen source
Adenine (N)
-6.7
-3.8
-5.2
-0.1
+0.1
nitrogen source
Adenine (N)
-5.5
-4.3
-5.2
+0.0
+0.3
nitrogen source
Adenine (N)
-5.3
-4.2
-4.4
-0.1
+0.1
RCH2 grown on a colony of ecoli
-1.4
-1.2
+0.2
-0.1
-0.0
RCH2 grown on a colony of N2A2
-0.8
-0.8
-0.5
-0.1
-0.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-1.6
-0.3
-0.6
+0.0
+0.2
anaerobic
Nitrate/ lactate media with Nitrate 250mM
-1.4
-0.7
+0.3
-0.2
-0.2
stress
Choline Lysine 20 mM
-0.4
-0.8
-0.4
-0.1
-0.4
stress
nitrite 2.5 mM
-0.7
-0.7
-0.4
+0.1
-0.2
RCH2 grown on a colony of N2A2
-0.6
-0.9
-0.2
-0.3
+0.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-1.4
-0.6
+0.5
-0.2
-0.3
stress
Carbenicillin 0.0065 mg/ml
-0.4
-0.6
-0.3
-0.3
-0.3
stress
nitrite 2.5 mM
-0.6
-0.6
-0.3
+0.0
-0.3
stress
2-Furfuraldehyde 0.05 vol%
-1.3
-0.4
-0.1
-0.1
+0.1
nitrogen source
L-Citrulline (N)
-0.5
-0.8
-0.2
+0.1
+0.1
stress
Cobalt chloride 0.07 mM
-0.3
-0.2
-1.0
+0.3
-0.2
stress
Choline Lysine 20 mM
+0.2
-1.2
+0.1
+0.2
-0.1
stress
Def Carbenicillin 0.008 mg/ml
-0.2
-1.1
+0.3
-0.0
+0.3
carbon source
propionate (C)
-0.9
-0.3
+0.3
+0.3
+0.1
stress
Nickel (II) chloride 1 mM
+0.8
-0.3
-0.5
-0.1
-0.2
RCH2 grown on a colony of ecoli
+0.1
-0.8
+0.6
+0.2
-0.2
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.3
-0.9
+0.5
+0.5
+0.1
RCH2 grown on a colony of N2F3
-1.2
-0.0
+0.3
+0.4
+0.4
carbon source
RCH2 defined media
+0.1
-1.0
+0.4
+0.1
+0.4
stress
Choline chloride 90 mM
-0.7
+0.4
+0.3
-0.3
+0.2
stress
L-Lysine 200 mM
-0.1
+0.9
-0.7
-0.0
-0.2
stress
Doxycycline hyclate 0.0002 mg/ml
+0.5
-0.6
+0.9
-0.4
-0.2
RCH2 grown on a colony of N2F3
-0.9
+0.5
+0.8
-0.2
+0.0
stress
syringaldehyde 4 mM
-0.7
+0.3
+0.5
+0.2
+0.1
stress
nitrate 250 mM
+0.0
+0.5
+0.9
-0.1
+0.3
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