Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_1181 and Psest_1182 are separated by 252 nucleotidesPsest_1182 and Psest_1183 are separated by 5 nucleotidesPsest_1183 and Psest_1184 are separated by 16 nucleotidesPsest_1184 and Psest_1185 are separated by 106 nucleotides Psest_1181: Psest_1181 - Glyoxylate carboligase (EC 4.1.1.47) (from data), at 1,283,252 to 1,285,033 _1181 Psest_1182: Psest_1182 - Transcriptional regulator, at 1,285,286 to 1,286,194 _1182 Psest_1183: Psest_1183 - hydroxyisourate hydrolase, at 1,286,200 to 1,286,610 _1183 Psest_1184: Psest_1184 - Uncharacterized protein, possibly involved in utilization of glycolate and propanediol, at 1,286,627 to 1,287,166 _1184 Psest_1185: Psest_1185 - heavy metal response regulator, at 1,287,273 to 1,287,947 _1185
Group Condition Psest_1181 Psest_1182 Psest_1183 Psest_1184 Psest_1185
carbon source Glycolic Acid (C) -5.4 -6.1 -0.1 -0.0 +0.0
carbon source Glycolic Acid (C) -4.3 -5.5 -0.2 -0.2 +0.7
stress Def 2-Furfuraldehyde 0.032 vol% +0.1 -0.1 -1.6 -0.4 -0.8
stress Carbenicillin 0.008 mg/ml -0.2 +0.0 -0.7 -1.0 -0.9
stress Nickel (II) chloride 0.75 mM +0.3 +0.3 -0.6 -0.5 -1.9
RCH2 grown on a colony of ecoli +0.1 +0.4 -0.9 +0.2 -2.1
stress D-Cycloserine 0.032 mg/ml +0.1 -0.5 -1.1 +0.3 -0.9
RCH2 grown on a colony of N2F3 -0.3 -0.3 +0.7 +0.1 -2.2
stress Benzethonium chloride 0.01 mM -0.1 -1.1 -0.5 +0.5 -0.9
nitrogen source nitrite (N) -0.4 -0.8 -1.3 +0.1 +0.3
temperature LB 30C timecourse2 timepoint 2 -0.1 -0.4 -1.8 -0.2 +0.5
stress Nickel (II) chloride 0.8 mM -0.1 +0.3 -0.8 +0.3 -1.3
lb LB +0.0 -0.1 +0.9 -0.6 -1.4
RCH2 grown on a colony of N2C3 -0.4 +0.9 +0.4 -0.1 -2.2
stress Thallium(I) acetate 0.1 mg/ml +0.5 +0.0 +0.5 -0.6 -1.4
stress Cobalt chloride 0.05 mM +0.7 +0.3 -0.7 +0.1 -1.1
RCH2 grown on a colony of Serratia +0.3 +0.3 -1.4 +0.8 -0.8
stress Doxycycline hyclate 0.0002 mg/ml +0.3 -0.2 -1.4 +1.2 -0.1
RCH2 grown on a colony of N2A2 +0.4 +0.2 +0.9 +0.2 -1.7
nitrogen source L-Isoleucine (N) -0.6 -0.2 -0.8 +0.7 +1.0
stress Cephalothin 0.04 mg/ml +0.5 +0.5 -1.4 +0.4 +0.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.1 -0.2 +0.8 +1.0 -0.9
stress Def Benzethonium chloride 0.008 mM +0.2 +0.4 -1.1 +0.6 +0.6
stress Choline chloride 90 mM +0.7 +0.7 +0.6 -0.2 -0.9
carbon source RCH2 defined media +0.1 +0.4 -1.1 +0.9 +0.6
stress nitrate 250 mM +0.0 +0.9 -1.0 +0.7 +0.7
lb LB +0.0 -0.6 +1.4 +0.6 +0.3
stress Chlorate 75 mM -0.4 +1.0 +1.0 -0.2 +0.4
stress Def Carbenicillin 0.02 mg/ml +0.7 +0.4 +0.5 +0.8 +0.6
stress Def Carbenicillin 0.008 mg/ml +0.0 +1.0 +0.2 +0.9 +1.3
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