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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_1169 and Psest_1170 are separated by 348 nucleotides
Psest_1170 and Psest_1171 are separated by 38 nucleotides
Psest_1171 and Psest_1172 are separated by 310 nucleotides
Psest_1172 and Psest_1173 are separated by 236 nucleotides
Psest_1169: Psest_1169 - Phospholipase/lecithinase/hemolysin, at 1,270,014 to 1,271,915
_1169
Psest_1170: Psest_1170 - diguanylate cyclase (GGDEF) domain, at 1,272,264 to 1,273,457
_1170
Psest_1171: Psest_1171 - nicotinate phosphoribosyltransferase, at 1,273,496 to 1,274,698
_1171
Psest_1172: Psest_1172 - Stress-induced bacterial acidophilic repeat motif., at 1,275,009 to 1,275,179
_1172
Psest_1173: Psest_1173 - hypothetical protein, at 1,275,416 to 1,275,649
_1173
Group
Condition
Psest
_1169
Psest
_1170
Psest
_1171
Psest
_1172
Psest
_1173
stress
Nalidixic 0.00390625 mg/ml
-0.3
+0.1
-0.6
N.D.
-1.6
stress
Paraquat dichloride 0.015 mg/ml
-0.3
-0.1
-0.6
N.D.
-0.3
RCH2 grown on a colony of N2C3
-0.3
+0.1
-0.8
N.D.
-0.4
anaerobic
Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten
-0.2
-0.2
+0.1
N.D.
-1.0
stress
Vanillin 2 mM
-0.2
-0.2
-0.4
N.D.
-0.5
stress
Carbenicillin 0.0065 mg/ml
-0.2
-0.2
-0.1
N.D.
-0.7
stress
Furfuryl Alcohol 0.2 vol%
+0.2
-0.4
-0.0
N.D.
-0.9
stress
Fusidic 0.016 mg/ml
-0.1
-0.2
+0.2
N.D.
-1.0
stress
Aluminum chloride 0.3 mM
-0.2
+0.1
+0.2
N.D.
-1.0
nitrogen source
L-Glutamic (N)
-0.2
+0.2
+0.0
N.D.
-0.8
stress
Cisplatin 0.003 mg/ml
+0.2
+0.3
+0.1
N.D.
-1.4
stress
Doxycycline hyclate 0.0002 mg/ml
-0.4
-0.6
-0.0
N.D.
+0.3
stress
Lactate-nitrate; anaerobic; dichromate stress sample1
-0.2
+0.4
-0.5
N.D.
-0.2
vitamin
With vitamins t2
+0.3
-0.3
+0.3
N.D.
-0.6
vitamin
With vitamins t1
+0.4
-0.2
+0.2
N.D.
-0.6
stress
nitrate 250 mM
+0.1
-0.8
+0.2
N.D.
+0.5
carbon source
propionate (C)
+0.1
-0.5
-0.2
N.D.
+0.6
stress
A22 0.002 mg/ml
+0.0
-0.2
+0.6
N.D.
-0.4
nitrogen source
Parabanic Acid (N)
-0.1
+0.2
-0.6
N.D.
+0.7
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample1
-0.0
+0.5
-0.6
N.D.
+0.4
RCH2 grown on a colony of ecoli
+0.4
-0.5
+0.2
N.D.
+0.3
stress
Choline chloride 90 mM
+0.1
+0.4
-0.5
N.D.
+0.4
stress
Cobalt chloride 0.05 mM
+0.2
-0.0
-0.3
N.D.
+0.7
nitrogen source
Putrescine (N)
+0.2
-0.3
+0.6
N.D.
+0.3
stress
Fusidic 0.016 mg/ml
+0.0
-0.2
+0.2
N.D.
+0.8
stress
1-ethyl-3-methylimidazolium acetate 20 mM
+0.3
+0.4
+0.4
N.D.
-0.2
carbon source
propionate (C)
+0.2
-0.2
+0.2
N.D.
+0.8
stress
Phosphomycin 0.012 mg/ml
-0.1
-0.1
+0.5
N.D.
+0.8
vitamin
No vitamins t1
+0.3
+0.0
+0.5
N.D.
+0.5
stress
Nalidixic 0.00390625 mg/ml
+0.3
+0.1
-0.3
N.D.
+1.2
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